shoichisakaguchi / NeoRdRpLinks
☆23Updated last year
Alternatives and similar repositories for NeoRdRp
Users that are interested in NeoRdRp are comparing it to the libraries listed below
Sorting:
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆85Updated 5 months ago
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆81Updated 10 months ago
- Supporting code for uncultivated gut virus manuscript☆75Updated 2 years ago
- Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets☆75Updated last year
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆98Updated 2 years ago
- ☆62Updated last year
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆78Updated last month
- Bioinformatics tool for Locus Visualisation☆125Updated 5 months ago
- Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and …☆32Updated 2 years ago
- A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during…☆78Updated last month
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆50Updated last month
- A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.☆124Updated 2 years ago
- Binning Virus Genomes from Metagenomes☆66Updated 3 years ago
- DDBJ Fast Annotation and Submission Tool☆83Updated last month
- A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome☆99Updated 6 months ago
- ☆79Updated last week
- Insertion sequences (Insertion Element) [https://en.wikipedia.org/wiki/Insertion_sequence] collected from ISfinder (https://isfinder.biot…☆70Updated 5 years ago
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆73Updated 5 months ago
- Prediction of prophages from bacterial genomes☆81Updated 4 months ago
- Assembly methods for nanopore-based metagenomic sequencing: a comparative study☆18Updated 5 years ago
- Horizontal gene transfer (HGT) identification pipeline☆63Updated 2 years ago
- GTDB taxonomy taxdump files with trackable TaxIds☆55Updated 6 months ago
- Effector prediction pipeline based on protein properties.☆14Updated 3 months ago
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆29Updated last year
- ☆59Updated last year
- ☆31Updated 8 months ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆69Updated 4 years ago
- Reorients assembled microbial sequences☆128Updated 2 months ago
- Precise host read removal☆107Updated last month
- Perl script for simulating PCR reactions. Extract sequences from a query based on primer sequences.☆47Updated 6 months ago