faylward / viralrecallLinks
Detection of NCLDV signatures in 'omic data
☆35Updated last year
Alternatives and similar repositories for viralrecall
Users that are interested in viralrecall are comparing it to the libraries listed below
Sorting:
- Discover and annotate the virome☆45Updated 3 weeks ago
- strain-level analysis tools☆39Updated 9 months ago
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆32Updated 3 weeks ago
- Phylogeny Enhanded Prediction of PAN-genome☆41Updated 5 years ago
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆42Updated 4 years ago
- Gene-flank analysis tool☆28Updated 7 months ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆36Updated 3 months ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated 2 years ago
- Bacterial GWAS analysis☆43Updated 2 weeks ago
- MAGScoT - a MAG scoring and refinement tool☆35Updated 10 months ago
- Metagenomic Intra-Species Diversity Analysis (MIDAS)☆39Updated 11 months ago
- Ley Lab MetaGenome Profiler DataBase generator☆50Updated 2 years ago
- MAG Circularization Method☆33Updated 3 years ago
- Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)☆62Updated 2 years ago
- Prophage Activity Estimator☆26Updated last year
- ☆18Updated 3 years ago
- Inferring bacterial recombination rates from large-scale sequencing datasets.☆43Updated 2 years ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆20Updated last year
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 3 years ago
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- Calculate assocations between genes and traits☆25Updated 5 months ago
- Automated strain separation of low-complexity metagenomes☆51Updated 3 years ago
- a pipeline for reconciliation of phylogenetic histories within a bacterial pangenome☆49Updated 2 years ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.☆24Updated last week
- RCandy: an R package for visualising homologous recombination events in bacterial genomes☆24Updated 3 years ago
- A taxonomic classifier of plasmids☆27Updated 4 years ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆43Updated last week
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆48Updated 2 weeks ago
- Assessing and Improving the quality of metagenomic assemblies☆29Updated 3 years ago