faylward / viralrecallLinks
Detection of NCLDV signatures in 'omic data
☆35Updated 11 months ago
Alternatives and similar repositories for viralrecall
Users that are interested in viralrecall are comparing it to the libraries listed below
Sorting:
- Gene-flank analysis tool☆27Updated 6 months ago
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- ☆25Updated 6 years ago
- Prophage Activity Estimator☆26Updated last year
- Taxonomic classification of viruses at Order and Family level☆20Updated 2 years ago
- Discover and annotate the virome☆43Updated 2 months ago
- MAG Circularization Method☆33Updated 3 years ago
- Ley Lab MetaGenome Profiler DataBase generator☆50Updated 2 years ago
- ☆18Updated 3 years ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- Downstream processing of VAMB binning for Viral Elucidation☆50Updated 11 months ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆31Updated 2 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated 2 years ago
- Gene Absence Presence Identification tool.☆26Updated 2 months ago
- MAGScoT - a MAG scoring and refinement tool☆35Updated 8 months ago
- IslandPath standalone software☆32Updated last year
- Calculate assocations between genes and traits☆23Updated 3 months ago
- ☆16Updated 5 years ago
- Bacterial GWAS analysis☆40Updated last month
- SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.☆23Updated 2 months ago
- CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data☆24Updated 2 weeks ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆35Updated 3 years ago
- Unified Human Gut Virome Catalog☆32Updated 11 months ago
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆28Updated 8 months ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆37Updated 2 years ago
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆31Updated last week
- EzAAI - High Throughput Prokaryotic AAI Calculator☆42Updated 8 months ago
- A python library for predicting phage lifestyle based on genome sequence☆38Updated last year
- KEGG Module Evaluation Tool☆30Updated last year
- Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data☆26Updated last week