An open database of vertebrate-virus interactions
☆46Jun 9, 2026Updated 4 months ago
Alternatives and similar repositories for virion
Users that are interested in virion are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ViromeScan allows the user to explore and taxonomically characterize the virome from metagenomic reads, efficiently denoising samples fro…☆13Feb 13, 2023Updated 3 years ago
- Four-in-one value pack of host-virus association data☆27Jun 30, 2022Updated 4 years ago
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆18Nov 29, 2023Updated 2 years ago
- Analises exploratórias de COVID19 no Brasil☆12Jan 15, 2022Updated 4 years ago
- ☆29Aug 6, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- VirBot: a protein-based RNA virus detector for metagenomic data☆35Jul 29, 2024Updated 2 years ago
- ☆13Feb 27, 2020Updated 6 years ago
- A tool for identifying phages and plasmids from metagenomic fragments using deep learning☆44Apr 13, 2021Updated 5 years ago
- Database of virus RdRP barcode sequences☆16Jul 5, 2024Updated 2 years ago
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆26Jan 8, 2026Updated 9 months ago
- This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.☆18Mar 16, 2026Updated 7 months ago
- viralVerify: viral contig verification tool☆79Feb 19, 2026Updated 7 months ago
- ☆15May 22, 2025Updated last year
- Supporting code for uncultivated gut virus manuscript☆81Jul 17, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Accurate identification of bacteriophages from metagenomic data using Transformer☆22Nov 6, 2024Updated last year
- a novel encoding method for viral identification in metagenomics☆15Sep 20, 2023Updated 3 years ago
- Code for de novo discovery of viral families in virome data☆16Jun 20, 2024Updated 2 years ago
- An R package for working with the Ecological Database of the World's Insect Pathogens (EDWIP)☆14Jan 15, 2025Updated last year
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆38May 25, 2026Updated 4 months ago
- Virus Identification☆29May 26, 2025Updated last year
- NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV)☆22May 3, 2025Updated last year
- The viral taxonomic assignment pipeline☆47Aug 31, 2026Updated last month
- ☆20May 13, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MARVEL: Metagenomic Analyses and Retrieval of Viral ELements☆51Apr 19, 2024Updated 2 years ago
- Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)☆56Jan 19, 2024Updated 2 years ago
- Binning Virus Genomes from Metagenomes☆76Jul 13, 2022Updated 4 years ago
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆47Sep 30, 2026Updated 2 weeks ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆77Aug 13, 2026Updated 2 months ago
- VIRIDIC (Virus Intergenomic Distance Calculator) computes pairwise intergenomic distances/similarities amongst viral genomes.☆20Oct 19, 2023Updated 2 years ago
- Viral genome coverage evaluation for metagenomic diagnostics☆27Jul 9, 2026Updated 3 months ago
- 🦠🧬 Unraveling Viral Genomes from Metagenomes☆11Jul 30, 2026Updated 2 months ago
- Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation☆123Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆20Apr 8, 2022Updated 4 years ago
- Bioinformatics pipeline used in the Laboratory of Viral Metagenomics (KU Leuven) to trim and assemble paired-end Illumina reads, and clas…☆11Nov 6, 2025Updated 11 months ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆22Feb 21, 2025Updated last year
- VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies☆153Sep 8, 2026Updated last month
- RNA dependent RNA Polymerase Palmprint Analysis☆13Aug 1, 2024Updated 2 years ago
- ☆35Oct 6, 2025Updated last year
- Nanopore plasmid pipeline (FAST5 basecalling, assembly, plasmid identification and antimicrobial resistance genes identification).☆13Apr 20, 2021Updated 5 years ago