VirBot: a protein-based RNA virus detector for metagenomic data
☆34Jul 29, 2024Updated last year
Alternatives and similar repositories for VirBot
Users that are interested in VirBot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆26Jan 8, 2026Updated 6 months ago
- Virus Identification☆27May 26, 2025Updated last year
- Accurate identification of bacteriophages from metagenomic data using Transformer☆22Nov 6, 2024Updated last year
- Multi-Teacher Distillation for Protein embedding☆12May 31, 2024Updated 2 years ago
- A community effort to create a shared resource for HMM-based RdRp discovery☆17Jul 14, 2026Updated last week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Phage virion protein classifier☆14Nov 6, 2024Updated last year
- Model for taxonomy classification☆16May 28, 2021Updated 5 years ago
- VIRIDIC (Virus Intergenomic Distance Calculator) computes pairwise intergenomic distances/similarities amongst viral genomes.☆20Oct 19, 2023Updated 2 years ago
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆38May 25, 2026Updated 2 months ago
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.☆10Dec 20, 2021Updated 4 years ago
- NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV)☆22May 3, 2025Updated last year
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆91Dec 27, 2024Updated last year
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆39Apr 9, 2026Updated 3 months ago
- Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data☆54Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- RNA virus analysis toolkit☆22Updated this week
- 🦠🧬 Unraveling Viral Genomes from Metagenomes☆11Oct 3, 2025Updated 9 months ago
- ☆24May 13, 2024Updated 2 years ago
- VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies☆152Updated this week
- Exploring the "dusk matter" of the RNA virosphere☆40Mar 25, 2022Updated 4 years ago
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Mar 21, 2020Updated 6 years ago
- An community curated awesome list of tools, software, databases and other resources for working/analysing RNA Viruses☆24Aug 15, 2025Updated 11 months ago
- Python package to plot a phylogenetic tree on an existing matplotlib axis.☆29Jul 21, 2025Updated last year
- Host prediction for phages☆28Nov 6, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- viralVerify: viral contig verification tool☆76Feb 19, 2026Updated 5 months ago
- The viral taxonomic assignment pipeline☆45Apr 16, 2026Updated 3 months ago
- Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.☆12Jan 5, 2023Updated 3 years ago
- CNN based classifier for detecting viral sequences among metagenomic contigs☆34Aug 24, 2020Updated 5 years ago
- An open database of vertebrate-virus interactions☆43Jun 9, 2026Updated last month
- Dadaist2 🟨 Highway to R☆13Mar 7, 2025Updated last year
- ☆15May 22, 2025Updated last year
- A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.☆23Nov 25, 2025Updated 7 months ago
- Set of tools for viral metagenomics.☆17Jun 1, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Scalable relaxed clock phylogenetic dating☆28Jul 5, 2026Updated 2 weeks ago
- a novel encoding method for viral identification in metagenomics☆15Sep 20, 2023Updated 2 years ago
- ☆27May 17, 2026Updated 2 months ago
- Graph convolutional neural network for host prediction☆18Jul 13, 2025Updated last year
- Local version of the virus identification and analysis web server (tool set)☆114May 13, 2026Updated 2 months ago
- An RNA virus strain-level identification tool for short reads.☆23Apr 6, 2026Updated 3 months ago
- R Data Exploration for Serratus☆16Mar 29, 2023Updated 3 years ago