amillard / tax_myPHAGELinks
Workflow to assign Taxonomy to a bacteriophage genome isolate
☆28Updated 2 months ago
Alternatives and similar repositories for tax_myPHAGE
Users that are interested in tax_myPHAGE are comparing it to the libraries listed below
Sorting:
- ☆37Updated last year
- Unified Human Gut Virome Catalog☆31Updated 10 months ago
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆33Updated 2 months ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆37Updated 5 months ago
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆31Updated last week
- Downstream processing of VAMB binning for Viral Elucidation☆50Updated 11 months ago
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆45Updated 2 weeks ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆34Updated 3 years ago
- ☆32Updated last year
- ☆16Updated 3 weeks ago
- Calculate assocations between genes and traits☆23Updated 2 months ago
- A python library for predicting phage lifestyle based on genome sequence☆37Updated last year
- Prophage Activity Estimator☆26Updated last year
- Small pipeline to cluster viral genomes based on their k-mer content. WiP☆16Updated 3 weeks ago
- Discover and annotate the virome☆42Updated last month
- ☆32Updated 3 months ago
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆21Updated last year
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆27Updated 7 months ago
- ☆25Updated last year
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- A simple program to classify the lifestyle of phages.☆17Updated 2 years ago
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆20Updated 5 months ago
- ☆22Updated 4 months ago
- Prophage Tracer: precisely tracing prophages in prokaryotic genomes using overlapping split-read alignment☆24Updated 7 months ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated last year
- Python script to upload bins and MAGs to ENA (European Nucleotide Archive)☆24Updated last month
- Bacterial GWAS analysis☆40Updated last week
- EzAAI - High Throughput Prokaryotic AAI Calculator☆41Updated 7 months ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆36Updated last month
- ☆20Updated 9 months ago