yulab-ql / mhaESC_genomeLinks
☆13Updated 4 months ago
Alternatives and similar repositories for mhaESC_genome
Users that are interested in mhaESC_genome are comparing it to the libraries listed below
Sorting:
- ☆20Updated 3 years ago
- Improving gene isoform quantification with miniQuant☆29Updated last month
- ☆38Updated 2 years ago
- ☆23Updated 11 months ago
- ☆27Updated 3 years ago
- ☆18Updated last year
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆69Updated 2 months ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆15Updated last year
- Long-read splice alignment with high accuracy☆63Updated last year
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 4 months ago
- Read level DNA methylation analysis of bisulfite converted sequencing data☆18Updated 4 months ago
- ☆34Updated last week
- HiCnv is used to call copy number variations and breakpoints from Hi-C data☆22Updated last year
- ☆25Updated 7 months ago
- Immuological gene typing and annotation for genome assembly☆38Updated 8 months ago
- ☆37Updated 6 years ago
- ☆14Updated 2 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆11Updated 5 years ago
- Long read to rMATS☆32Updated 2 years ago
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆31Updated 2 years ago
- ☆22Updated 3 months ago
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆36Updated 6 years ago
- ☆37Updated last year
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆34Updated 3 months ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposabl…☆13Updated last year
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated last month
- Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.☆10Updated 3 years ago