LuyiTian / FLAMESLinks
Full-length transcriptome splicing and mutation analysis
☆85Updated last year
Alternatives and similar repositories for FLAMES
Users that are interested in FLAMES are comparing it to the libraries listed below
Sorting:
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆78Updated 2 years ago
- Tutorial Website☆61Updated 4 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 5 months ago
- Estimate locus specific human LINE-1 expression.☆39Updated 2 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- Estimation of Promoter Activity from RNA-Seq data☆56Updated 5 months ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆83Updated 4 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 3 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 2 months ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated 2 months ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆83Updated 11 months ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆76Updated 2 weeks ago
- SingleCell Nanopore sequencing data analysis☆62Updated 7 months ago
- ☆82Updated 8 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- ☆49Updated 3 years ago
- ☆102Updated last month
- RNA editing tests☆17Updated 5 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆65Updated last year
- ☆60Updated 5 months ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆57Updated 7 months ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated 2 months ago
- A list of alternative splicing analysis resources☆46Updated 9 months ago
- Genomic coordinates of problematic genomic regions as GRanges☆49Updated 3 weeks ago
- mgatk: mitochondrial genome analysis toolkit☆109Updated 11 months ago
- A toolkit for QC and visualization of ATAC-seq results.☆72Updated 11 months ago
- Links to ATAC-seq analysis tools☆74Updated 4 years ago
- An R package to time somatic mutations☆65Updated 5 years ago