☆51Jun 27, 2026Updated 3 months ago
Alternatives and similar repositories for hprc_intermediate_assembly
Users that are interested in hprc_intermediate_assembly are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Variant Calling for the HPRC2☆19May 26, 2026Updated 4 months ago
- Assemblies from HPP Year 1 production☆83May 9, 2023Updated 3 years ago
- A complete diploid human genome☆161Aug 10, 2026Updated 2 months ago
- ☆66Jun 14, 2021Updated 5 years ago
- ☆144Aug 26, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆23Apr 15, 2024Updated 2 years ago
- Telomere-to-Telomere diploid Indian Genome☆15Mar 5, 2026Updated 7 months ago
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆20Sep 24, 2026Updated 2 weeks ago
- Targeted genotyper for complex polymorphic genes☆50Updated this week
- pangenome alignment, implicit/explicit graph, and variants for human pangenome project release 2☆24Sep 9, 2026Updated last month
- GBWT-based handle graph☆36Aug 19, 2026Updated last month
- Point Cloud Local Ancestry Inference (PCLAI)☆24Jul 23, 2026Updated 2 months ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆37Jun 12, 2025Updated last year
- Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions☆38Apr 28, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Evaluating genome assemblies☆127Mar 3, 2026Updated 7 months ago
- Long read aligner for cyclic and acyclic pangenome graphs☆41Dec 20, 2023Updated 2 years ago
- Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)☆85Jun 10, 2022Updated 4 years ago
- Code repository for the T2T-Y paper☆25Jul 11, 2023Updated 3 years ago
- GFA insert into GenomicSQLite☆49Jun 7, 2021Updated 5 years ago
- GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.☆40Aug 20, 2026Updated last month
- Centromere mapping and annotation pipeline☆28Jun 26, 2026Updated 3 months ago
- Open Human Genome Library☆70Dec 22, 2025Updated 9 months ago
- strange cross-platform, performance-oriented and interactive pangenome and large graph visualization☆55Jul 29, 2026Updated 2 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Multiple sequence alignment of long tandem repeats☆34Oct 7, 2026Updated last week
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆36Aug 18, 2025Updated last year
- Misassembly Identifier☆28Sep 5, 2026Updated last month
- Genotyping of copy number sensitive allele-specific haplotypes☆29Aug 28, 2026Updated last month
- A tool for sniffing out the differences in vari-Ants☆58Sep 29, 2026Updated 2 weeks ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated 2 years ago
- A toolkit for exploring regions of variation in pangenomes☆15Jun 12, 2026Updated 4 months ago
- ☆43Oct 6, 2025Updated last year
- Phased structural variant discovery in pangenomes☆44Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated last year
- PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium☆14Apr 5, 2025Updated last year
- ☆19May 10, 2023Updated 3 years ago
- De novo construction of isoforms from long-read data☆47Sep 9, 2026Updated last month
- Easy genomic regions for short-read variant calling☆46Sep 10, 2025Updated last year
- Repository☆10Oct 23, 2024Updated last year
- Genome browser hub for the T2T genomes and resources☆33Oct 1, 2026Updated last week