☆45Mar 19, 2026Updated last week
Alternatives and similar repositories for hprc_intermediate_assembly
Users that are interested in hprc_intermediate_assembly are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Assemblies from HPP Year 1 production☆80May 9, 2023Updated 2 years ago
- A complete diploid human genome☆145Mar 9, 2026Updated 2 weeks ago
- ☆61Jun 14, 2021Updated 4 years ago
- Telomere-to-Telomere diploid Indian Genome☆15Mar 5, 2026Updated 3 weeks ago
- Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions☆36May 14, 2025Updated 10 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆127Oct 18, 2023Updated 2 years ago
- GFA insert into GenomicSQLite☆49Jun 7, 2021Updated 4 years ago
- Misassembly Identifier☆18Mar 4, 2026Updated 3 weeks ago
- GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.☆37May 29, 2025Updated 9 months ago
- Multiple sequence alignment of long tandem repeats☆25Jan 9, 2026Updated 2 months ago
- Evaluating genome assemblies☆118Mar 3, 2026Updated 3 weeks ago
- Pangenome Mutation-Annotated Networks☆38Feb 13, 2026Updated last month
- ☆21Feb 5, 2026Updated last month
- implicit pangenome graph☆98Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆20Apr 15, 2024Updated last year
- Genotyping of copy number sensitive allele-specific haplotypes☆27Nov 6, 2025Updated 4 months ago
- The complete sequence of a Chinese individual☆12Oct 8, 2024Updated last year
- Code repository for the T2T-Y paper☆24Jul 11, 2023Updated 2 years ago
- ☆38Oct 6, 2025Updated 5 months ago
- Targeted genotyper for complex polymorphic genes☆38Updated this week
- PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium☆12Apr 5, 2025Updated 11 months ago
- A toolkit for exploring regions of variation in pangenomes☆14Feb 14, 2026Updated last month
- ☆19May 10, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Workflow Description Language (WDL) scripts for common vg workflows☆23Dec 15, 2025Updated 3 months ago
- Easy genomic regions for short-read variant calling☆45Sep 10, 2025Updated 6 months ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆32Jun 12, 2025Updated 9 months ago
- Genome Assembly Validation via Inter-SUNK distances in ONT reads☆15Feb 20, 2023Updated 3 years ago
- ☆13Mar 1, 2026Updated 3 weeks ago
- Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)☆80Jun 10, 2022Updated 3 years ago
- WDL’s and Dockerfiles for assembly QC process☆72Jul 26, 2025Updated 8 months ago
- Long read aligner for cyclic and acyclic pangenome graphs☆40Dec 20, 2023Updated 2 years ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆29Sep 21, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Everything but the kitchen sink☆13Feb 6, 2025Updated last year
- ☆15Jun 29, 2021Updated 4 years ago
- generating hardware accelerators for pangenomic graph queries☆41Mar 19, 2026Updated last week
- ☆11Dec 9, 2022Updated 3 years ago
- GBWT-based handle graph☆31Mar 17, 2026Updated last week
- Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).☆107Jul 23, 2024Updated last year
- Draw a dot plot from a paf alignment☆38Sep 18, 2025Updated 6 months ago