kensung-lab / INSurVeyorLinks
An insertion caller for Illumina paired-end WGS data.
☆23Updated 2 months ago
Alternatives and similar repositories for INSurVeyor
Users that are interested in INSurVeyor are comparing it to the libraries listed below
Sorting:
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆38Updated last year
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆37Updated 6 months ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆46Updated 2 months ago
- Structural variant merging tool☆55Updated last year
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 8 months ago
- ☆25Updated 2 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆58Updated 2 months ago
- ☆37Updated last year
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆19Updated last year
- MethPhaser: methylation-based haplotype phasing of human genomes☆50Updated 8 months ago
- ☆38Updated 2 years ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆64Updated 2 weeks ago
- Working space for the GIAB TR benchmarking project☆23Updated last year
- ☆32Updated last year
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 4 months ago
- perSVade: personalized Structural Variation detection☆40Updated 2 months ago
- Variant annotation and merging pipeline☆39Updated 3 months ago
- Long-read splice alignment with high accuracy☆63Updated last year
- ☆25Updated 7 months ago
- ☆21Updated 8 months ago
- ☆49Updated last year
- Structural variant caller☆55Updated 3 years ago
- ☆51Updated 6 years ago
- Simple library/pipeline to generate and handle Hi-C data.☆39Updated last year
- ☆33Updated 3 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆21Updated 3 years ago
- Detection and genotyping of structural variants☆19Updated last month
- Tumour-only somatic mutation calling using long reads☆28Updated last year
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 5 months ago