An insertion caller for Illumina paired-end WGS data.
☆24Aug 22, 2025Updated 10 months ago
Alternatives and similar repositories for INSurVeyor
Users that are interested in INSurVeyor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 7 months ago
- Ultra-efficient mapping-free structural variation genotyper☆20Jul 28, 2021Updated 4 years ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆26Apr 29, 2024Updated 2 years ago
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆42Apr 22, 2026Updated 2 months ago
- GeneMiner: a tool for extracting phylogenetic markers from next-generation sequencing data☆12Feb 22, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Determining tandem repeat lengths using raw nanopore signals.☆15Sep 11, 2023Updated 2 years ago
- ☆15Mar 1, 2026Updated 4 months ago
- ☆21Nov 1, 2019Updated 6 years ago
- Calling deletions using deep convolutional neural☆25Feb 12, 2020Updated 6 years ago
- TIDDIT - structural variant calling☆80Mar 22, 2026Updated 3 months ago
- These scripts reformat a VCF into a SQLite database, with R☆15Jul 15, 2021Updated 4 years ago
- Tools for the analysis of structural variation in genomes☆81Feb 23, 2026Updated 4 months ago
- Ultra-fast, high-performing structural variation (SV) detector☆24Apr 26, 2023Updated 3 years ago
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- A tool for estimating repeat sizes☆215Jan 30, 2024Updated 2 years ago
- ☆20Nov 17, 2025Updated 7 months ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Jun 30, 2017Updated 9 years ago
- Toolkit for calling structural variants using short or long reads☆115Jun 15, 2026Updated 3 weeks ago
- Detection and genotyping of structural variants☆21May 27, 2026Updated last month
- ☆20Mar 13, 2026Updated 3 months ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆55Mar 7, 2025Updated last year
- ☆15Aug 22, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A deep learning approach to de novo variant calling in next generation sequencing data☆21Jun 19, 2026Updated 2 weeks ago
- Linear-time de novo Long Read Assembler☆42Mar 19, 2026Updated 3 months ago
- ☆16Apr 2, 2024Updated 2 years ago
- FLT3 ITD detection (ITDseek) and simulation (ITDsim)☆14Feb 27, 2019Updated 7 years ago
- Annotation and Ranking of Structural Variation☆302Jun 19, 2026Updated 2 weeks ago
- A minimap2 implementation with binseq inputs☆18Dec 11, 2025Updated 6 months ago
- Code for building and testing variant ranking strategies☆18Apr 13, 2026Updated 2 months ago
- ☆13Jul 17, 2024Updated last year
- ☆30Sep 11, 2025Updated 9 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Location of structural errors in a genome assembly and structural variations between a pair of genomes☆11Sep 27, 2019Updated 6 years ago
- A structural variation pipeline for short-read sequencing☆205Jul 2, 2026Updated last week
- DNN-based small variant caller☆12May 2, 2022Updated 4 years ago
- KAUST Assembly Read Error Correction Tool☆15Aug 15, 2015Updated 10 years ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆60Sep 6, 2025Updated 10 months ago
- Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gig…☆14Aug 6, 2022Updated 3 years ago
- TRGT Repeat expansion summary☆10Apr 10, 2023Updated 3 years ago