kensung-lab / INSurVeyorLinks
An insertion caller for Illumina paired-end WGS data.
☆23Updated 3 weeks ago
Alternatives and similar repositories for INSurVeyor
Users that are interested in INSurVeyor are comparing it to the libraries listed below
Sorting:
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆33Updated 2 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆49Updated 6 months ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆37Updated last year
- ☆24Updated last week
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆45Updated 2 weeks ago
- Working space for the GIAB TR benchmarking project☆21Updated 10 months ago
- ☆32Updated last year
- ☆48Updated last year
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆32Updated 4 months ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆57Updated last week
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆50Updated 6 months ago
- modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data☆16Updated last year
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆23Updated 2 years ago
- Structural variant merging tool☆54Updated last year
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆66Updated this week
- ☆33Updated 2 years ago
- Variant annotation and merging pipeline☆39Updated last month
- perSVade: personalized Structural Variation detection☆40Updated last week
- Detection and genotyping of structural variants☆18Updated 5 months ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆30Updated 2 years ago
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Error correction of ONT transcript reads☆58Updated 2 years ago
- Structural variant caller☆55Updated 3 years ago
- Tumour-only somatic mutation calling using long reads☆27Updated 10 months ago
- Structural Variants Pipeline for Long Reads☆44Updated 7 years ago
- ☆81Updated 6 months ago
- ☆21Updated 6 months ago
- Structural variant VCF annotation, duplicate removal and comparison☆33Updated 6 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆68Updated 3 months ago