marbl / T2T-BrowserLinks
Genome browser hub for the T2T genomes and resources
☆25Updated 2 months ago
Alternatives and similar repositories for T2T-Browser
Users that are interested in T2T-Browser are comparing it to the libraries listed below
Sorting:
- Easy genomic regions for short-read variant calling☆45Updated 2 months ago
- Methylmap is a tool for visualization of modified nucleotide frequencies for large cohort sizes.☆21Updated 9 months ago
- Kmer Analysis of Pileups for Genotyping☆34Updated this week
- ☆21Updated 9 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆38Updated 7 months ago
- ☆45Updated 2 weeks ago
- This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files☆29Updated 3 months ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆46Updated 3 months ago
- Population-wide Deletion Calling☆35Updated 7 months ago
- This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to comp…☆30Updated last year
- Genotyping of copy number sensitive allele-specific haplotypes☆27Updated last month
- Structural variant (SV) analysis tools☆39Updated last year
- Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome☆82Updated 2 weeks ago
- Tumour-only somatic mutation calling using long reads☆28Updated last year
- ☆18Updated last year
- Functions to compare a SV call sets against a truth set.☆30Updated 5 months ago
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated 2 weeks ago
- A long-read analysis toolbox for cancer and population genomics☆23Updated 5 months ago
- Immuological gene typing and annotation for genome assembly☆38Updated 8 months ago
- a lexicographically-based GTF/GFF sorter☆35Updated 7 months ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆50Updated 9 months ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆27Updated last year
- PGR-TK: Pangenome Research Tool Kit☆21Updated 8 months ago
- Benchmark structural variant calls against a reference set☆17Updated last week
- A lightweight library for working with PAF (Pairwise mApping Format) files☆30Updated 3 years ago
- ☆21Updated 11 months ago
- VNTR annotation using motif selection☆39Updated 3 months ago
- ☆25Updated 7 months ago
- ☆33Updated 3 years ago
- A bioinformatics tool written in Rust to find palindromic sequences in DNA☆37Updated 3 months ago