Alternatives and similar repositories for DRB_TT-seq

Users that are interested in DRB_TT-seq are comparing it to the libraries listed below

• bvaldebenitom / SoloTE
  ☆33Updated last year
• lrylaarsdam / amethyst
  A comprehensive toolkit for single-cell methylation sequencing data analysis
  ☆28Updated 2 weeks ago
• tanlongzhi / dip-c
  Tools to analyze Dip-C (or other 3C/Hi-C) data
  ☆72Updated last year
• mcgilldinglab / MATES
  A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data
  ☆32Updated last week
• 3UTR / 3aQTL-pipe
  Mapping 3′UTR alternative polyadenylation quantitative trait loci through population-scale transcriptomic and genomic data
  ☆12Updated 2 years ago
• ren-lab / hic-pipeline
  ☆25Updated 4 years ago
• shizhuoxing / scISA-Tools
  single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…
  ☆26Updated last year
• 3UTR / DaPars2
  Dynamics analysis of Alternative PolyAdenylation from RNA-seq
  ☆63Updated 2 years ago
• bodegalab / irescue
  Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq
  ☆20Updated this week
• stjude / ROSE
  ROSE: RANK ORDERING OF SUPER-ENHANCERS
  ☆58Updated last month
• ElkonLab / scAPA
  This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.
  ☆24Updated 4 years ago
• YaqiangCao / cLoops2
  Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.
  ☆52Updated 6 months ago
• ay-lab / ATACProc
  ATAC-seq processing pipeline
  ☆34Updated 3 years ago
• KChen-lab / Monopogen
  SNV calling from single cell sequencing
  ☆118Updated last year
• xryanglab / SCASL
  single-cell clustering based on alternative splicing landscapes
  ☆23Updated last year
• FenyoLab / L1EM
  Estimate locus specific human LINE-1 expression.
  ☆39Updated last month
• fairliereese / LR-splitpipe
  Demultiplexing and debarcoding tool designed for LR-Split-seq data.
  ☆23Updated 2 years ago
• satijalab / PASTA
  ☆21Updated last year
• wenweixiong / MARVEL
  ☆52Updated last year
• cxzhu / Paired-Tag
  Analysis of Paired-Tag datasets
  ☆43Updated last year
• gxiaolab / REDITs
  RNA editing tests
  ☆17Updated 5 years ago
• Tian-Dechao / diffDomain
  DiffDomain is a statistically sound method for detecting differential TADs between conditions
  ☆17Updated 5 months ago
• lkmklsmn / MitoTrace
  ☆18Updated last year
• GuoliangLi-HZAU / ChIA-PET_Tool_V3
  ChIA-PET, HiChIP, PLAC-Seq data analysis, with linker detection, linker filter, or restriction process for HiChIP, mapping, call cluster …
  ☆21Updated last year
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆60Updated 4 years ago
• BMILAB / scAPAtrap
  ☆25Updated last month
• raphael-group / decifer
  DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…
  ☆22Updated last year
• ay-lab / FitHiChIP
  Statistically Significant loops from HiChIP data
  ☆46Updated last year
• single-cell-genetics / cellSNP
  Pileup biallelic SNPs from single-cell and bulk RNA-seq data
  ☆81Updated 3 years ago
• mbassalbioinformatics / CnRAP
  Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.
  ☆19Updated 6 months ago