FenyoLab / L1EMLinks
Estimate locus specific human LINE-1 expression.
☆35Updated 2 years ago
Alternatives and similar repositories for L1EM
Users that are interested in L1EM are comparing it to the libraries listed below
Sorting:
- Tutorial Website☆59Updated 4 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- release version☆54Updated 2 years ago
- Links to ATAC-seq analysis tools☆68Updated 3 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆73Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- ☆58Updated 3 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆63Updated 11 months ago
- ☆61Updated 10 months ago
- ☆30Updated 6 years ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆27Updated 4 months ago
- ☆43Updated 2 years ago
- A list of alternative splicing analysis resources☆44Updated 2 months ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 4 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- A computation framework for genome-wide detection of enhancer-hijacking events from chromatin interaction data in re-arranged genomes☆65Updated last year
- HMMRATAC peak caller for ATAC-seq data☆100Updated 7 months ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated last year
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated last month
- fork of RSeQC python RNAseq metrics suit of tools☆48Updated 6 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 4 years ago
- ATAC-seq processing pipeline☆33Updated 3 years ago
- tools to find circRNAs in RNA-seq data☆43Updated 7 years ago
- Allele-specific alignment sorting☆58Updated 2 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆37Updated 4 months ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆67Updated last week
- A set of pipelines for Hi-C and ChIP-Seq analysis.☆46Updated last year
- Quantitation and visualization of differential alternative splicing events☆10Updated 2 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago