arangrhie / T2T-HG002YLinks
Code repository for the T2T-Y paper
☆24Updated 2 years ago
Alternatives and similar repositories for T2T-HG002Y
Users that are interested in T2T-HG002Y are comparing it to the libraries listed below
Sorting:
- ☆15Updated 4 years ago
- Phasing reads with secondary alignments☆20Updated 9 months ago
- A module for improving the insertion sequences of structural variant calls☆31Updated 4 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Updated last year
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Updated 8 years ago
- Set of script for the paper on the cattle graph genome☆13Updated 2 years ago
- Kmer Analysis of Pileups for Genotyping☆32Updated this week
- Tandem Repeats Finder: a program to analyze DNA sequences☆16Updated last month
- A method for measuring chromosome-specific telomere length from long reads☆22Updated last year
- Construct and Analyze the North American Vitis pangenome☆24Updated 2 weeks ago
- ☆17Updated last year
- Very simple and configurable all-in-one dotplot program☆13Updated 2 years ago
- Characterization of Structural Variation in Chinese samples☆18Updated 3 years ago
- Genome Assembly 102☆15Updated 4 months ago
- Repository☆10Updated 10 months ago
- Detect and phase minor SNVs from long-read sequencing data☆13Updated 3 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Updated 11 months ago
- Consensus genome annotation using OMA☆26Updated 2 months ago
- Lightweight mosaic/somatic SV caller for long reads (WIP)☆29Updated 8 months ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Updated 2 years ago
- Repository for pipeline code☆26Updated last year
- ☆12Updated last year
- ☆16Updated 2 years ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆26Updated 2 months ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆27Updated 11 months ago
- Invertory of TE-gene isoforms☆11Updated last year
- Long Read Based SV Calling Tools Analysis☆14Updated last year
- defusion☆14Updated 4 years ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆36Updated 2 years ago
- ☆31Updated 5 years ago