yanailab / knn-smoothingLinks
K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data
☆59Updated 3 years ago
Alternatives and similar repositories for knn-smoothing
Users that are interested in knn-smoothing are comparing it to the libraries listed below
Sorting:
- ☆29Updated 2 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Single-cell Hierarchical Poisson Factorization☆73Updated 3 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- ☆28Updated 6 years ago
- Quasilinear data representations for single-cell omics data analysis☆44Updated 2 years ago
- ☆16Updated 8 years ago
- Population balance analysis☆44Updated 6 years ago
- Bootstrap imputation for scRNAseq data☆12Updated 5 years ago
- ☆38Updated last month
- Biclustering algorithm☆57Updated 7 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Updated 4 years ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 7 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago
- This is the code release for paper Continuous State HMMs for Modeling Time Series Single Cell RNA-Seq Data☆22Updated 7 years ago
- MultiMAP for integration of single cell multi-omics☆55Updated 2 years ago
- Big data Regression for predicting DNase I hypersensitivity☆31Updated last year
- Fast motif matching in R☆46Updated last year
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Multi-sample Unified Discriminant ANalysis☆74Updated 2 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 6 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆51Updated this week
- Generate cellular maps of differentiation manifolds with complex topologies.☆27Updated 7 years ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40Updated 3 years ago