lkmklsmn / insctLinks
scRNAseq integration with triplet neural networks
☆41Updated 2 years ago
Alternatives and similar repositories for insct
Users that are interested in insct are comparing it to the libraries listed below
Sorting:
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 6 years ago
- Fast motif matching in R☆46Updated last year
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- Multi-omics studies are available here☆52Updated 3 years ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Updated 3 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- ☆29Updated 2 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆55Updated last year
- CiteFuse:☆28Updated 2 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- RNA velocity validation☆22Updated 3 years ago
- Explore and download data from the recount3 project☆36Updated last month
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.☆34Updated last month
- Automated cell filtering for single-cell RNA sequencing data☆25Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- ☆43Updated 4 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated last month
- ☆20Updated 8 years ago
- ☆28Updated 6 years ago
- easy access to benchmark datasets☆50Updated 7 years ago
- Analyzing cellular niches in spatial transcriptomics data☆31Updated 11 months ago
- Algorithms for single-cell analysis☆29Updated 4 years ago