Geometry-preserving random sampling
☆96Oct 29, 2024Updated last year
Alternatives and similar repositories for geosketch
Users that are interested in geosketch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Panoramic stitching of single cell data☆295Jul 14, 2025Updated 10 months ago
- Multi-study integration of cellular trajectories☆19Jun 1, 2020Updated 5 years ago
- Exploring dimension-reduced embeddings☆111Jul 6, 2022Updated 3 years ago
- Algorithms for single-cell analysis☆29Jul 19, 2021Updated 4 years ago
- ☆18Aug 14, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Reference mapping for single-cell genomics☆404Mar 21, 2026Updated 2 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆102Apr 16, 2026Updated last month
- Mapping out the coarse-grained connectivity structures of complex manifolds.☆242May 23, 2020Updated 6 years ago
- An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.☆174Jan 26, 2024Updated 2 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆18Feb 8, 2019Updated 7 years ago
- scover☆23Nov 3, 2023Updated 2 years ago
- Diverse sampling for single-cell datasets☆16Mar 22, 2026Updated 2 months ago
- Convert between AnnData and SingleCellExperiment☆150Updated this week
- Scripts for data and figure generation in SAVER paper☆18Jan 5, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R package for integrating and analyzing multiple single-cell datasets☆429Feb 4, 2026Updated 3 months ago
- User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins☆78Mar 28, 2026Updated 2 months ago
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆70May 7, 2026Updated 3 weeks ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆54Dec 1, 2025Updated 5 months ago
- CellRank: dynamics from multi-view single-cell data☆449May 4, 2026Updated 3 weeks ago
- COMET Single-Cell Marker Detection tool☆34Jun 21, 2022Updated 3 years ago
- Fast, sensitive and accurate integration of single-cell data with Harmony☆650May 12, 2026Updated 2 weeks ago
- Port of symphony algorithm of single-cell reference atlas mapping to Python☆34May 19, 2026Updated last week
- ☆362Dec 9, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆41Sep 17, 2021Updated 4 years ago
- A guide to using the Python scRNA-seq analysis package Scanpy from R☆15Apr 27, 2020Updated 6 years ago
- R package implementation of Milo for testing for differential abundance in KNN graphs☆433May 11, 2026Updated 2 weeks ago
- Detect doublets in single-cell RNA-seq data☆86Jul 3, 2019Updated 6 years ago
- Differential expression analysis for single-cell RNA-seq data.☆206Oct 21, 2025Updated 7 months ago
- ☆11May 30, 2023Updated 2 years ago
- Single-Cell Clustering Assessment Framework☆110Oct 27, 2023Updated 2 years ago
- Batch balanced KNN☆178Oct 11, 2023Updated 2 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆53Jan 6, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆61Aug 30, 2022Updated 3 years ago
- Quantifying experimental perturbations at single cell resolution☆114Sep 27, 2024Updated last year
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated 2 years ago
- Benchmarking analysis of data integration tools☆415Apr 27, 2026Updated last month
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Apr 19, 2021Updated 5 years ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 6 years ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Oct 25, 2019Updated 6 years ago