Geometry-preserving random sampling
☆96Oct 29, 2024Updated last year
Alternatives and similar repositories for geosketch
Users that are interested in geosketch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Panoramic stitching of single cell data☆297Jul 14, 2025Updated 8 months ago
- Multi-study integration of cellular trajectories☆19Jun 1, 2020Updated 5 years ago
- Exploring dimension-reduced embeddings☆111Jul 6, 2022Updated 3 years ago
- Algorithms for single-cell analysis☆29Jul 19, 2021Updated 4 years ago
- ☆18Aug 14, 2017Updated 8 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Reference mapping for single-cell genomics☆400Mar 21, 2026Updated last week
- Coarse-graining of large single-cell RNA-seq data into metacells☆98Feb 23, 2026Updated last month
- Mapping out the coarse-grained connectivity structures of complex manifolds.☆237May 23, 2020Updated 5 years ago
- An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.☆170Jan 26, 2024Updated 2 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Feb 8, 2019Updated 7 years ago
- scover☆24Nov 3, 2023Updated 2 years ago
- Diverse sampling for single-cell datasets☆16Mar 22, 2026Updated last week
- Convert between AnnData and SingleCellExperiment☆147Updated this week
- Scripts for data and figure generation in SAVER paper☆18Jan 5, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins☆79Updated this week
- R package for integrating and analyzing multiple single-cell datasets☆427Feb 4, 2026Updated last month
- CellRank: dynamics from multi-view single-cell data☆433Mar 9, 2026Updated 2 weeks ago
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆67Mar 20, 2026Updated last week
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Dec 1, 2025Updated 3 months ago
- Fast, sensitive and accurate integration of single-cell data with Harmony☆631Updated this week
- COMET Single-Cell Marker Detection tool☆32Jun 21, 2022Updated 3 years ago
- Port of symphony algorithm of single-cell reference atlas mapping to Python☆33Mar 16, 2026Updated last week
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆40Sep 17, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆361Dec 9, 2021Updated 4 years ago
- A guide to using the Python scRNA-seq analysis package Scanpy from R☆15Apr 27, 2020Updated 5 years ago
- R package implementation of Milo for testing for differential abundance in KNN graphs☆423Sep 4, 2025Updated 6 months ago
- Detect doublets in single-cell RNA-seq data☆86Jul 3, 2019Updated 6 years ago
- Differential expression analysis for single-cell RNA-seq data.☆206Oct 21, 2025Updated 5 months ago
- Single-Cell Clustering Assessment Framework☆108Oct 27, 2023Updated 2 years ago
- ☆11May 30, 2023Updated 2 years ago
- Batch balanced KNN☆178Oct 11, 2023Updated 2 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆61Aug 30, 2022Updated 3 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- supporting code for the multinomial single cell RNA-Seq paper☆53Jan 6, 2021Updated 5 years ago
- Quantifying experimental perturbations at single cell resolution☆113Sep 27, 2024Updated last year
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated last year
- Benchmarking analysis of data integration tools☆408Sep 17, 2025Updated 6 months ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Apr 19, 2021Updated 4 years ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 6 years ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Oct 25, 2019Updated 6 years ago