rnabioco / clustifyrdataLinks
Reference data for cell-type assignment with clustifyr
☆13Updated 2 years ago
Alternatives and similar repositories for clustifyrdata
Users that are interested in clustifyrdata are comparing it to the libraries listed below
Sorting:
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- Explore and share your scRNAseq clustering results☆50Updated last year
- ☆41Updated 4 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 11 months ago
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆21Updated 3 years ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- An r package that works as a wrapper to homologene☆46Updated last year
- Clone of the Bioconductor repository for the scRNAseq package.☆28Updated 5 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- R package for Bioconductor submission☆35Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆20Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- An analytics package for single cell data☆22Updated 3 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Algorithms for single-cell analysis☆29Updated 3 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 2 weeks ago
- ☆60Updated 4 years ago
- Clone of the Bioconductor repository for the scran package.☆42Updated 10 months ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 3 weeks ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆55Updated 4 years ago
- ☆29Updated 7 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago