Reference data for cell-type assignment with clustifyr
☆13Nov 3, 2022Updated 3 years ago
Alternatives and similar repositories for clustifyrdata
Users that are interested in clustifyrdata are comparing it to the libraries listed below
Sorting:
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆10Jul 21, 2025Updated 7 months ago
- ☆11Jan 7, 2020Updated 6 years ago
- tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data☆17Jun 4, 2019Updated 6 years ago
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆125Apr 16, 2025Updated 10 months ago
- fast hierarchical clustering for large-scale single-cell data☆10Jul 11, 2021Updated 4 years ago
- Single Cell RNA PolyA Site Discovery☆11Jan 28, 2026Updated last month
- Explore and share your scRNAseq clustering results☆50Sep 6, 2023Updated 2 years ago
- ☆13Mar 20, 2021Updated 4 years ago
- Automated marker-based annotation of cell types☆14Aug 8, 2022Updated 3 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆61Aug 30, 2022Updated 3 years ago
- ggplot2 geoms to outline groups of data points☆16Nov 24, 2023Updated 2 years ago
- Zero-inflated mixture model for single-cell data.☆14Feb 16, 2016Updated 10 years ago
- Human Primary T cells: A Practical Guide☆15Sep 18, 2018Updated 7 years ago
- pCMF R package☆14Apr 16, 2019Updated 6 years ago
- A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.☆13May 3, 2023Updated 2 years ago
- A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques☆16Jun 1, 2021Updated 4 years ago
- GrandPrix☆16May 27, 2019Updated 6 years ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆17Dec 18, 2024Updated last year
- kallisto index tag extractor☆20Jul 6, 2019Updated 6 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 2 years ago
- ☆19Apr 15, 2025Updated 10 months ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆41Apr 26, 2024Updated last year
- Examples using Clustergrammer2 to explore high-dimensional datasets.☆40Aug 24, 2020Updated 5 years ago
- Stupid Simple Elastic Compute Cloud☆16Dec 7, 2023Updated 2 years ago
- A study to compare methods for clustering of scRNA-seq data☆46Jul 19, 2024Updated last year
- Cell type matching in single-cell RNA-sequencing data using FR-Match☆19Feb 16, 2026Updated last week
- ☆20Mar 28, 2017Updated 8 years ago
- ☆22Aug 25, 2022Updated 3 years ago
- Spatially-resolved Transcriptomics via Epitope Anchoring☆19Apr 1, 2024Updated last year
- ☆29Sep 4, 2023Updated 2 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Jul 26, 2017Updated 8 years ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Oct 25, 2019Updated 6 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48May 23, 2020Updated 5 years ago
- Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:☆24Jun 8, 2021Updated 4 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- ☆22Sep 17, 2025Updated 5 months ago
- Fast phenograph, CyTOF☆26Aug 19, 2022Updated 3 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Jan 4, 2023Updated 3 years ago