Reference data for cell-type assignment with clustifyr
☆13Nov 3, 2022Updated 3 years ago
Alternatives and similar repositories for clustifyrdata
Users that are interested in clustifyrdata are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆10Jul 21, 2025Updated 9 months ago
- Automated marker-based annotation of cell types☆14Aug 8, 2022Updated 3 years ago
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆125Apr 16, 2025Updated last year
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago
- Single Cell RNA PolyA Site Discovery☆11Jan 28, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11Jan 7, 2020Updated 6 years ago
- ggplot2 geoms to outline groups of data points☆16Nov 24, 2023Updated 2 years ago
- tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data☆17Jun 4, 2019Updated 6 years ago
- fast hierarchical clustering for large-scale single-cell data☆11Jul 11, 2021Updated 4 years ago
- ☆13Mar 20, 2021Updated 5 years ago
- scoreCT: Automated Cell Type Annotation☆16Apr 18, 2022Updated 4 years ago
- A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.☆14May 3, 2023Updated 2 years ago
- ☆20Apr 15, 2025Updated last year
- GWAS Survival Package in R☆13Nov 16, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Explore and share your scRNAseq clustering results☆52Sep 6, 2023Updated 2 years ago
- Sinab is not a browser.☆26Dec 2, 2020Updated 5 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆61Aug 30, 2022Updated 3 years ago
- Stupid Simple Elastic Compute Cloud☆16Dec 7, 2023Updated 2 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- ☆29Sep 4, 2023Updated 2 years ago
- An R package to analyze single-cell V(D)J data☆29Nov 13, 2023Updated 2 years ago
- Lightweight Alignment Based Resolution of Alternative Three Prime Ends☆10Jan 26, 2024Updated 2 years ago
- GrandPrix☆16May 27, 2019Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- a tool to detect differentially expressed circular RNA☆13Nov 12, 2025Updated 5 months ago
- ☆16Oct 18, 2023Updated 2 years ago
- This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation wi…☆11Sep 12, 2025Updated 7 months ago
- Cell type matching in single-cell RNA-sequencing data using FR-Match☆20Feb 16, 2026Updated 2 months ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆18Dec 18, 2024Updated last year
- miARma-seq: a comprehensive tool for miRNA, mRNA and circRNA analysis☆16Jun 29, 2025Updated 10 months ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Jan 4, 2023Updated 3 years ago
- TCGA BLCA tmb prediction by Hongming Xu☆13Nov 1, 2020Updated 5 years ago
- Examples using Clustergrammer2 to explore high-dimensional datasets.☆40Aug 24, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A rapido and lightweight method for PGS computation☆14Apr 20, 2026Updated last week
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 3 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48May 23, 2020Updated 5 years ago
- Automated, probabilistic assignment of cell types in scRNA-seq data☆213Jan 9, 2023Updated 3 years ago
- ☆23Sep 17, 2025Updated 7 months ago
- Human brain, >200,000 nuclei☆25Jun 17, 2021Updated 4 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆49Apr 21, 2025Updated last year