kuanglab / single-cell-review
☆25Updated 6 years ago
Alternatives and similar repositories for single-cell-review
Users that are interested in single-cell-review are comparing it to the libraries listed below
Sorting:
- A study to compare methods for clustering of scRNA-seq data☆43Updated 9 months ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆29Updated 4 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆74Updated last year
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆17Updated 4 years ago
- Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data☆26Updated 5 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆15Updated 4 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- Code to support: "pcaReduce: hierarchical clustering of single cell transcriptional profiles"☆19Updated last year
- ☆15Updated 8 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Predicting transcription factor binding in single cells through deep learning☆13Updated 2 years ago
- SHARP: Single-cell RNA-seq Hyper-fast and Accurate processing via ensemble Random Projection☆16Updated 4 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 9 years ago
- Reproducing all analyses and figures for the ASAP-seq paper☆29Updated 3 years ago
- ☆20Updated 5 years ago
- Code for the MNN manuscript figures☆50Updated 6 years ago
- ☆44Updated 2 years ago
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆27Updated 5 years ago
- A portable and fast single cell type identifier☆64Updated 4 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- Evaluation of Cell Type Annotation R Packages on Single Cell RNA-seq Data☆29Updated last year
- simpler single cell RNAseq data clustering☆40Updated 2 months ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆39Updated last year
- Code for further development of the mutual nearest neighbours batch correction method, as implemented in the batchelor package.☆22Updated 5 years ago
- An R implementation of the SINCERA pipeline for single cell RNA-seq profiling analysis☆27Updated 4 years ago
- Assembles a graph manifold from time series single-cell RNAseq data☆17Updated 4 years ago