☆26Apr 3, 2019Updated 7 years ago
Alternatives and similar repositories for single-cell-review
Users that are interested in single-cell-review are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆15Jun 7, 2021Updated 5 years ago
- Variational autoencoder for single cell RNA-seq datasets☆44Aug 15, 2017Updated 8 years ago
- Single-cell RNA-seq clustering and annotation☆13Oct 26, 2020Updated 5 years ago
- Porting of Protein Activity and Pathway Inference to single cell and Python.☆14Updated this week
- GrandPrix☆17May 27, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Clustering through Imputation and Dimensionality Reduction☆64Sep 21, 2017Updated 8 years ago
- single-cell graph attentional clustering☆13Feb 10, 2022Updated 4 years ago
- Reference-free quality assessment for Hi-C sequencing data☆13Apr 30, 2024Updated 2 years ago
- co-expressed gene-set enrichment analysis☆13Nov 20, 2023Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- Marker Selection by matching manifolds and elastic net☆23Oct 22, 2024Updated last year
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Dec 16, 2020Updated 5 years ago
- DistMap☆14Nov 23, 2021Updated 4 years ago
- This contains the dataset for comparing scRNA-seq analysis methods☆94Aug 26, 2020Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Normalization for single cell RNA-seq data☆10Aug 25, 2022Updated 3 years ago
- Additional code and analysis from the single-cell integration benchmarking project☆72Dec 19, 2022Updated 3 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆62Aug 30, 2022Updated 3 years ago
- ☆13Nov 13, 2018Updated 7 years ago
- ☆19Dec 1, 2021Updated 4 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆13Apr 21, 2021Updated 5 years ago
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆12Oct 1, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 5 years ago
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- ☆15Aug 17, 2023Updated 2 years ago
- Biostatistics 6301: Introduction to Statistical Computing☆14Aug 15, 2024Updated last year
- ☆16May 13, 2022Updated 4 years ago
- ☆43Jun 11, 2022Updated 4 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- ☆29Sep 4, 2023Updated 2 years ago
- ☆15Jun 17, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- An R package for the analysis and interpretation of cell migration tracks.☆14Sep 19, 2025Updated 8 months ago
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 4 years ago
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Nov 17, 2024Updated last year
- Variant Calling for the HPRC2☆16May 26, 2026Updated 2 weeks ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 3 years ago
- Deep learning for single-cell transcript counts☆89Mar 14, 2025Updated last year
- ☆39Aug 4, 2021Updated 4 years ago