Alternatives and similar repositories for enhance

Users that are interested in enhance are comparing it to the libraries listed below

• raphael-group / netNMF-sc
  netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data
  ☆23Updated 4 years ago
• markrobinsonuzh / scRNAseq_clustering_comparison
  A study to compare methods for clustering of scRNA-seq data
  ☆43Updated last year
• linnarsson-lab / cytograph
  Algorithms for single-cell analysis
  ☆29Updated 4 years ago
• brianhie / trajectorama
  Multi-study integration of cellular trajectories
  ☆19Updated 5 years ago
• jingshuw / descend
  ☆18Updated 3 years ago
• quon-titative-biology / scAlign
  A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…
  ☆39Updated 3 years ago
• KChen-lab / SCMER
  Marker Selection by matching manifolds and elastic net
  ☆23Updated 10 months ago
• vals / Blog
  ☆37Updated 2 months ago
• single-cell-genetics / singlecell_neuroseq_paper
  Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation
  ☆21Updated last year
• mhu10 / scPanoView
  ☆11Updated 5 years ago
• skinnider / SCT-MoA
  Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"
  ☆15Updated 6 years ago
• debsin / dropClust
  Version 2.1.0 released
  ☆23Updated 6 years ago
• jingshuw / SAVERX
  R package for transfer learning of single-cell RNA-seq denoising
  ☆30Updated 3 years ago
• mohuangx / SAVER-paper
  Scripts for data and figure generation in SAVER paper
  ☆17Updated 4 years ago
• theislab / pseudodynamics
  Dynamic models for single-cell RNA-seq time series.
  ☆40Updated 6 years ago
• const-ae / transformGamPoi-Paper
  ☆28Updated 2 years ago
• liulab-dfci / lisa
  epigenome analysis to rank transcription factors
  ☆13Updated 5 years ago
• jessemzhang / tn_test
  post-clustering differential expression test
  ☆36Updated 6 years ago
• davemcg / scEiaD
  Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas
  ☆26Updated last year
• bioFAM / slalom
  ☆29Updated 2 years ago
• csoneson / rna_velocity_quant
  Evaluation of the effect of quantification choices on RNA velocity estimates
  ☆27Updated 3 years ago
• khodosevichlab / CellAnnotatoR
  Automated marker-based annotation of cell types
  ☆13Updated 3 years ago
• xzhoulab / DRComparison
  Comparison of dimensionality reduction methods
  ☆30Updated 5 years ago
• klarman-cell-observatory / scPlot
  Single cell interactive plotting tools
  ☆23Updated 5 years ago
• dpeerlab / seqc
  Single-Cell Sequencing Quality Control and Processing Software
  ☆16Updated 3 years ago
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆19Updated 3 years ago
• igrabski / scRNAseq-cell-type
  Probabilistic gene expression barcodes for cell type annotation
  ☆25Updated 3 years ago
• MarioniLab / geneBasisR
  R package for gene selection using k-NN graphs.
  ☆13Updated 2 years ago
• limix / CellRegMap
  CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
  ☆22Updated last year
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆18Updated 3 years ago