mhu10 / scPanoViewLinks
☆11Updated 5 years ago
Alternatives and similar repositories for scPanoView
Users that are interested in scPanoView are comparing it to the libraries listed below
Sorting:
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆14Updated 6 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 10 months ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Updated 3 years ago
- Version 2.1.0 released☆23Updated 5 years ago
- Scripts for data and figure generation in SAVER paper☆17Updated 4 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- ☆18Updated 3 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Updated 2 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆15Updated 4 years ago
- benchmark for single-cell RNA-seq imputation methods☆26Updated last year
- Algorithms for single-cell analysis☆29Updated 4 years ago
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆21Updated 3 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆21Updated last year
- The million-scale method for single-cell analysis☆10Updated 2 years ago
- ☆12Updated 4 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆16Updated 3 years ago
- Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:☆24Updated 4 years ago
- ☆18Updated 4 years ago
- Automated marker-based annotation of cell types☆13Updated 3 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Updated 3 years ago
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Updated last year
- ☆37Updated 2 months ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Updated 3 years ago
- Marker gene selection from scRNA-seq data☆15Updated 5 years ago
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆12Updated 11 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year