yanailab / moanaLinks
Moana: Robust cell type classification of single-cell RNA-Seq data
☆24Updated 6 years ago
Alternatives and similar repositories for moana
Users that are interested in moana are comparing it to the libraries listed below
Sorting:
- A study to compare methods for clustering of scRNA-seq data☆43Updated 11 months ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆27Updated last year
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- ☆20Updated 8 years ago
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆14Updated 4 years ago
- ☆29Updated 2 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- Processing of single cell RNAseq data for the recovery of TCRs in python☆28Updated 4 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- ☆22Updated 5 years ago
- ☆36Updated 11 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- ☆37Updated 8 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- CiteFuse:☆28Updated 2 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- An analytics package for single cell data☆22Updated 3 years ago
- ☆41Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Updated 4 years ago