BIMSBbioinfo / netSmoothLinks
netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation
☆28Updated last year
Alternatives and similar repositories for netSmooth
Users that are interested in netSmooth are comparing it to the libraries listed below
Sorting:
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Updated 3 years ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- ☆37Updated last week
- Automated marker-based annotation of cell types☆13Updated 3 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 6 years ago
- ☆12Updated last year
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Updated 4 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 6 years ago
- kallisto index tag extractor☆20Updated 6 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- ☆28Updated 6 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Updated 5 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 8 years ago
- Code associated with MIX-seq manuscript☆15Updated 5 years ago
- ☆13Updated 6 years ago
- ☆18Updated 4 years ago
- Collection of useful methods for single cell analysis☆14Updated last year
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- XEnograft Visualization & Analysis☆11Updated last week
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Updated 6 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- ☆21Updated 8 years ago