LuyiTian / sc_mixologyLinks
This contains the dataset for comparing scRNA-seq analysis methods
☆91Updated 5 years ago
Alternatives and similar repositories for sc_mixology
Users that are interested in sc_mixology are comparing it to the libraries listed below
Sorting:
- ☆47Updated 3 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- Single-cell RNA-seq Gene Expression Recovery☆111Updated 9 months ago
- Code for the MNN manuscript figures☆50Updated 6 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 4 months ago
- ☆85Updated 5 years ago
- Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data☆104Updated 2 years ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆149Updated 6 months ago
- Accurate and robust imputation of scRNA-seq data☆96Updated 6 years ago
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆124Updated 4 months ago
- Single-Cell Clustering Assessment Framework☆105Updated last year
- ☆63Updated 4 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago
- A repo with random short code snippets☆41Updated 6 years ago
- Single Cell Cluster Evaluation☆97Updated 4 years ago
- SingleCellNet: classify single cells across species and platforms☆138Updated 2 years ago
- ☆59Updated last year
- Publication Page for MPAL Paper 2019☆83Updated 5 years ago
- Normalize CITEseq Data☆66Updated 4 months ago
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆92Updated 3 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- ☆41Updated 2 months ago
- ☆58Updated 4 years ago
- Linear trajectory inference for single-cell RNA-seq☆61Updated last year
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆45Updated 9 years ago
- Methods to compute Local Inverse Simpson's Index (LISI)☆68Updated 4 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆72Updated 7 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- ☆55Updated 4 years ago