LuyiTian / sc_mixologyLinks
This contains the dataset for comparing scRNA-seq analysis methods
☆92Updated 4 years ago
Alternatives and similar repositories for sc_mixology
Users that are interested in sc_mixology are comparing it to the libraries listed below
Sorting:
- Publication Page for MPAL Paper 2019☆82Updated 4 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- Single Cell Cluster Evaluation☆94Updated 3 years ago
- ☆46Updated 3 years ago
- A repo with random short code snippets☆41Updated 6 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆74Updated last year
- Snakemake pipeline that works with the scIB package to benchmark data integration methods.☆73Updated 4 months ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated 2 years ago
- Single-cell RNA-seq Gene Expression Recovery☆109Updated 6 months ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆83Updated 9 months ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆106Updated 2 years ago
- ☆62Updated 4 years ago
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated last month
- SingleCellNet: classify single cells across species and platforms☆137Updated last year
- Methods to compute Local Inverse Simpson's Index (LISI)☆61Updated 3 years ago
- Code for the MNN manuscript figures☆50Updated 6 years ago
- ☆85Updated 4 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- Clone of the Bioconductor repository for the scran package.☆42Updated 9 months ago
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆27Updated 5 years ago
- ☆55Updated 4 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆69Updated 3 years ago
- Single-Cell Clustering Assessment Framework☆101Updated last year
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆71Updated 6 years ago
- Detect doublets in single-cell RNA-seq data☆85Updated 5 years ago
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆123Updated last month
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- Analysis of cell-cell communication at single-cell resolution☆101Updated 8 months ago
- Multi-sample Unified Discriminant ANalysis☆73Updated 2 years ago