☆32Mar 4, 2024Updated 2 years ago
Alternatives and similar repositories for M3Drop
Users that are interested in M3Drop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository contains HCA Benchmarking codes☆26Nov 11, 2019Updated 6 years ago
- R package for benchmarking single cell analysis methods☆32Oct 4, 2023Updated 2 years ago
- Single-cell RNA-seq Gene Expression Recovery☆114Nov 28, 2024Updated last year
- A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments☆129Jun 28, 2021Updated 4 years ago
- ☆16Dec 11, 2018Updated 7 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Jun 30, 2023Updated 2 years ago
- ☆56Dec 13, 2020Updated 5 years ago
- This contains the dataset for comparing scRNA-seq analysis methods☆93Aug 26, 2020Updated 5 years ago
- simpler single cell RNAseq data Visualization☆10Feb 28, 2025Updated last year
- A R package for Grade of Membership model and Visualization of counts data:☆33Jan 15, 2021Updated 5 years ago
- Single Cell RNA-seq UMI Filtering Facilitator☆10Oct 6, 2025Updated 5 months ago
- R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)☆22Aug 28, 2019Updated 6 years ago
- This repository is retired software☆14Oct 29, 2015Updated 10 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆61Aug 30, 2022Updated 3 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Dec 9, 2021Updated 4 years ago
- ☆29Feb 1, 2023Updated 3 years ago
- DUBStepR (Determining the Underlying Basis using Step-wise Regression) is a feature selection algorithm for cell type identification in s…☆11May 26, 2021Updated 4 years ago
- 10x single cell RNA-seq data from the developing mouse retina☆16Mar 11, 2021Updated 5 years ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆152Feb 13, 2025Updated last year
- BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/pa…☆87Sep 17, 2025Updated 6 months ago
- Single-Cell Clustering Assessment Framework☆108Oct 27, 2023Updated 2 years ago
- zero-inflated negative binomial gene expression in R☆20Jan 31, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Supporting information of 'Single-cell RNA sequencing of a European and an African lymphoblastoid cell line'☆10Feb 27, 2020Updated 6 years ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆49May 3, 2019Updated 6 years ago
- R package for plotting 3D graphical visualization of multi-omics data.☆27Mar 16, 2022Updated 4 years ago
- A common data format and inference environment for single-cell trajectories 📦☆19Nov 26, 2025Updated 4 months ago
- Differential Expression with Capture Efficiency adjustmeNT☆15Jan 3, 2023Updated 3 years ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆12Mar 21, 2019Updated 7 years ago
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆45Mar 13, 2024Updated 2 years ago
- main repo: https://github.com/ucscGenomeBrowser/cellBrowser/ - Python pipeline and Javascript scatter plot library for single-cell datase…☆114Jan 20, 2023Updated 3 years ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 10 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- benchmark for single-cell RNA-seq imputation methods☆29Mar 16, 2024Updated 2 years ago
- R package for robust clustering of single cell RNA sequencing data☆40Jul 10, 2023Updated 2 years ago
- Imputing dropout events in single-cell RNA-sequencing data☆18Dec 7, 2020Updated 5 years ago
- Robust and scalable inference of cell lineages via consensus clustering. Features novel algorithms for the comparison of weighted graphs …☆14Jan 16, 2017Updated 9 years ago
- SLICER algorithm for inferring cell trajectories. See details in Welch et al., Genome Biology 2016: http://genomebiology.biomedcentral.co…☆15Oct 17, 2017Updated 8 years ago
- Accurate and fast cell marker gene identification with COSG☆63Feb 8, 2026Updated last month
- Wasserstein Generative Adversarial Network for analysing scRNAseq data☆34Dec 17, 2020Updated 5 years ago