Probabilistic single-cell pseudotime with Edward+Tensorflow
☆12Oct 5, 2017Updated 8 years ago
Alternatives and similar repositories for ouijaflow
Users that are interested in ouijaflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆28May 15, 2024Updated last year
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆12Mar 21, 2019Updated 7 years ago
- Descriptive probabilistic marker gene approach to single-cell pseudotime inference☆30Nov 29, 2019Updated 6 years ago
- consistent quantification of external RNA-seq data sets☆58Dec 21, 2023Updated 2 years ago
- ☆13Nov 13, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆21Jul 4, 2017Updated 8 years ago
- Probabilistic pseudotime for single-cell RNA-seq data☆11Oct 6, 2017Updated 8 years ago
- Discrete Distributional Differential Expression☆22Jan 3, 2019Updated 7 years ago
- Implementation of the Tower Method, a novel approach to handling missing values.☆12Mar 12, 2024Updated 2 years ago
- 🐶 hlabud: HLA genotype analysis in R☆17Apr 11, 2025Updated 11 months ago
- Single-cell Case Control Analysis☆54Feb 26, 2026Updated last month
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Nov 16, 2021Updated 4 years ago
- ☆14Aug 30, 2025Updated 6 months ago
- Processing WGS aDNA data using the ReichLab protocol☆13Mar 8, 2019Updated 7 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Apr 20, 2023Updated 2 years ago
- VDJ Clonotyping & Analysis Tools☆50Mar 7, 2025Updated last year
- software package for integrative genetic association analysis☆36Jul 8, 2023Updated 2 years ago
- scRNAseq integration with triplet neural networks☆41Feb 2, 2026Updated last month
- Response to blog post about Salmon☆37Sep 3, 2017Updated 8 years ago
- Code for the paper on t-SNE with variable degree of freedom☆25Aug 5, 2020Updated 5 years ago
- Fast Inference of Networks from Directed Regulations☆22Dec 7, 2023Updated 2 years ago
- PROGENY Python implementation☆12Apr 5, 2022Updated 3 years ago
- BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/pa…☆87Sep 17, 2025Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Jun 22, 2022Updated 3 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Feb 8, 2023Updated 3 years ago
- ☆13Feb 2, 2023Updated 3 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11May 5, 2020Updated 5 years ago
- Exploring dimension-reduced embeddings☆111Jul 6, 2022Updated 3 years ago
- haplotypes genotypes and alleles example decision synthesizer☆20Jun 13, 2019Updated 6 years ago
- Estimate linkage disequilibrium between unphased loci☆11Jun 9, 2015Updated 10 years ago
- manifold metric and correction techniques for (Bayesian) GPLVM from GPy☆12Mar 1, 2020Updated 6 years ago
- ☆12Jul 6, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- We have moved to https://github.com/limix/limix.☆23Aug 29, 2017Updated 8 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Aug 22, 2017Updated 8 years ago
- Code for implementing Mendelian randomization investigations☆20Nov 9, 2015Updated 10 years ago
- SV☆14May 3, 2018Updated 7 years ago
- logistic factor analysis☆16Jan 29, 2026Updated 2 months ago
- ☆15Jun 3, 2019Updated 6 years ago
- python convenience functions for working with Stan models (via pystan)☆13Jan 3, 2018Updated 8 years ago