camlab-bioml / cancerseaLinks
a simple R data package for curated cancer pathway-specific gene lists
☆11Updated 5 years ago
Alternatives and similar repositories for cancersea
Users that are interested in cancersea are comparing it to the libraries listed below
Sorting:
- Lung cancer 10X analysis☆11Updated 4 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- ☆13Updated 7 months ago
- Single-Cell Inference of Class Switch Recombination☆19Updated 3 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆18Updated 9 months ago
- analysis script for GBM single cell RNA seq data☆18Updated 4 years ago
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆10Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 3 weeks ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆28Updated last year
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆13Updated last year
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- ☆17Updated 4 months ago
- ☆20Updated last year
- ☆9Updated 11 months ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆15Updated 3 years ago
- R and MATLAB scripts for MAGICAL☆11Updated 11 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago
- Ordering gene-expression and functional events in single-cell experiments☆22Updated last year
- ☆18Updated 10 months ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 3 years ago
- ☆10Updated 2 years ago
- ☆12Updated last year
- Constructing gene regulatory networks by integrating scRNA-seq and scATAC-seq data☆12Updated 3 years ago
- The codes and files for the study of subsolid nodules (SSN).☆14Updated 4 years ago
- Tumor-Infiltrating CD8 Lymphocytes states prediction☆12Updated last year
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆14Updated 6 months ago
- ☆9Updated 9 months ago
- ☆15Updated 2 years ago