wanwenzeng / coupleNMF
☆28Updated 5 years ago
Alternatives and similar repositories for coupleNMF:
Users that are interested in coupleNMF are comparing it to the libraries listed below
- ☆30Updated 2 years ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 6 years ago
- Mapping the Functional Landscape of TCR Repertoire☆34Updated 3 years ago
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 6 months ago
- ☆20Updated 5 years ago
- ☆20Updated 5 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- Clone identification from single-cell data☆61Updated 2 years ago
- ☆25Updated 3 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated 11 months ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆29Updated 4 years ago
- Code for the MNN manuscript figures☆51Updated 6 years ago
- Single cell epigenomic clustering based on accessibility pattern☆23Updated 2 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆31Updated 8 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 3 years ago
- scOpen: single-cell open chromatin analysis via NMF modelling☆26Updated 2 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆74Updated last year
- Single-cell Case Control Analysis☆48Updated 4 months ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 8 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆43Updated last year
- ☆16Updated 5 years ago
- ☆34Updated last week
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Updated 6 months ago
- Code for Universal Single-Cell Matching with Unpaired Feature Sets☆21Updated 3 years ago
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆27Updated 5 years ago
- ☆31Updated 5 years ago
- Evaluation of Cell Type Annotation R Packages on Single Cell RNA-seq Data☆29Updated last year