GreenleafLab / MPAL-Single-Cell-2019Links
Publication Page for MPAL Paper 2019
☆83Updated 5 years ago
Alternatives and similar repositories for MPAL-Single-Cell-2019
Users that are interested in MPAL-Single-Cell-2019 are comparing it to the libraries listed below
Sorting:
- Analysis of cell-cell communication at single-cell resolution☆104Updated 11 months ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- ☆62Updated 6 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆108Updated 4 months ago
- Methods to compute Local Inverse Simpson's Index (LISI)☆67Updated 3 years ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆106Updated 2 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- Snakemake pipeline that works with the scIB package to benchmark data integration methods.☆76Updated 7 months ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆83Updated last year
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- Single-Cell Clustering Assessment Framework☆105Updated last year
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- Metacell - Single-cell mRNA Analysis☆116Updated 7 months ago
- Single Cell Cluster Evaluation☆96Updated 4 years ago
- R package for semi-supervised single-cell data integration☆87Updated 2 weeks ago
- simpler single cell RNAseq data clustering☆40Updated 5 months ago
- A package for automated processing of single cell RNA-seq data in cancer☆108Updated 10 months ago
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆64Updated 3 years ago
- ☆47Updated 3 years ago
- ☆55Updated 11 months ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆29Updated 5 years ago
- Functional Inference of Gene Regulation☆46Updated last year
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 4 months ago
- ☆31Updated 2 years ago
- Draw phylogenetic trees of tumor evolution☆82Updated 2 years ago
- ☆63Updated 4 years ago
- AUCell: score single cells with gene regulatory networks☆164Updated last year
- pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.☆73Updated 3 weeks ago