caokai1073 / UnionComLinks
The Software of UnionCom Algorithm
☆25Updated last year
Alternatives and similar repositories for UnionCom
Users that are interested in UnionCom are comparing it to the libraries listed below
Sorting:
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆36Updated 2 years ago
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆27Updated 6 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆61Updated last year
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆41Updated last year
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 3 years ago
- Context specific and dynamic gene regulatory network reconstruction and analysis☆122Updated 2 weeks ago
- Code for Universal Single-Cell Matching with Unpaired Feature Sets☆21Updated 4 years ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆31Updated 4 years ago
- Functional Inference of Gene Regulation☆48Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated 2 months ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- Methods to compute Local Inverse Simpson's Index (LISI)☆69Updated 4 years ago
- Trajectory inference and differential expression over multiple conditions in scRNA-seq☆25Updated 4 years ago
- scWGCNA☆61Updated 2 years ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆65Updated 3 months ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 4 months ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆56Updated 5 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆32Updated last year
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Updated last year
- All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs☆41Updated 2 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 10 months ago
- ☆41Updated 4 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 9 months ago
- ☆63Updated 5 years ago