wycwycpku / RSCORE
☆25Updated 3 years ago
Alternatives and similar repositories for RSCORE:
Users that are interested in RSCORE are comparing it to the libraries listed below
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 3 years ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆19Updated 2 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆38Updated 2 months ago
- Mapping the Functional Landscape of TCR Repertoire☆34Updated 3 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆31Updated last year
- Functional Inference of Gene Regulation☆40Updated 8 months ago
- Low-dimensional Projection of Single Cell Velocity☆28Updated 2 years ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 2 years ago
- Snakemake pipeline for plate scATAC-seq processing☆26Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆26Updated 3 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆33Updated 4 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆31Updated 8 months ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- ZornLab / Single-cell-transcriptomics-reveals-a-signaling-roadmap-coordinating-endoderm-and-mesoderm-lineageCode and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆9Updated 4 years ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆18Updated 8 months ago
- Single cell epigenomic clustering based on accessibility pattern☆23Updated 2 years ago
- scWGCNA☆56Updated 2 years ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆29Updated 4 years ago
- ☆39Updated 3 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆29Updated 6 months ago
- ☆31Updated 5 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated 11 months ago
- ☆30Updated 2 years ago
- ☆21Updated last year
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆34Updated last year
- Inferring CNV data from single cell ATAC seq☆23Updated last year
- The scripts used for the analyses in TOME project☆23Updated 3 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆29Updated 8 months ago