caleblareau / BuenColorsLinks
R package of colors for the Buenrostro Lab
☆86Updated last year
Alternatives and similar repositories for BuenColors
Users that are interested in BuenColors are comparing it to the libraries listed below
Sorting:
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆62Updated 2 months ago
- ☆88Updated 4 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆79Updated 8 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆81Updated 3 years ago
- R package for robust clustering of single cell RNA sequencing data☆40Updated 2 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆52Updated 2 years ago
- Normalize CITEseq Data☆66Updated this week
- ☆74Updated 2 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆57Updated 4 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆71Updated 10 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆85Updated last year
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- ☆55Updated 4 years ago
- ☆59Updated last year
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Updated 3 years ago
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆53Updated 3 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆60Updated last month
- An R toolkit for estimation of cell composition from bulk expression data☆80Updated 5 months ago
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆42Updated last year
- Tutorial for AMSI BioInfoSummer 2018☆30Updated 6 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- Links to ATAC-seq analysis tools☆71Updated 4 years ago
- ☆41Updated 3 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Reference transcriptome indices build from kallisto for popular organisms☆44Updated last year