☆18Jun 13, 2019Updated 7 years ago
Alternatives and similar repositories for VIPER
Users that are interested in VIPER are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Imputing dropout events in single-cell RNA-sequencing data☆18Dec 7, 2020Updated 5 years ago
- Accurate and robust imputation of scRNA-seq data☆101Aug 21, 2019Updated 6 years ago
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆90Jan 31, 2022Updated 4 years ago
- Marker gene selection from scRNA-seq data☆16Sep 15, 2020Updated 5 years ago
- Analyzing chromatin accessibility data in R☆19Jun 23, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Dissecting the effects of DNA copy number variations on transcriptional programs at single-cell resolution☆14Feb 13, 2026Updated 4 months ago
- SCDC☆47Jun 20, 2025Updated last year
- A portable and fast single cell type identifier☆64May 12, 2021Updated 5 years ago
- Comparison of single cell normalization strategies☆11Aug 13, 2021Updated 4 years ago
- MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological …☆384Oct 3, 2024Updated last year
- ☆13Jun 7, 2024Updated 2 years ago
- An algorithm used to classify the cell types from single cell rna sequence data.☆10Jan 24, 2021Updated 5 years ago
- ☆16Sep 21, 2021Updated 4 years ago
- Assessing the purity of single cell population☆151Jun 3, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- UNCURL is a tool for single cell RNA-seq data analysis.☆15Jun 27, 2022Updated 4 years ago
- Single-cell RNA-seq Gene Expression Recovery☆116Nov 28, 2024Updated last year
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated 11 months ago
- ☆16Jul 9, 2024Updated last year
- Reconstruction of spatial context of gene expression with optimal transport☆11Mar 14, 2019Updated 7 years ago
- Spatially constrained color profiling for visualizing single-cell resolution spatial data☆26Sep 23, 2024Updated last year
- represent each cell in UMAP plots as a pie chart☆16Sep 27, 2021Updated 4 years ago
- Code used to benchmark Xenium☆86Apr 10, 2026Updated 2 months ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆127Mar 19, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆28Jan 28, 2020Updated 6 years ago
- Scripts used for the ACT paper☆12May 6, 2021Updated 5 years ago
- ☆132Mar 27, 2022Updated 4 years ago
- Rmarkdown / compiled html files for human reprogramming dataset analysis☆18Jun 11, 2020Updated 6 years ago
- R/Bioconductor package for working with 10x scATACseq data☆42Nov 13, 2023Updated 2 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Sep 8, 2023Updated 2 years ago
- ☆151Mar 20, 2026Updated 3 months ago
- ☆30Mar 18, 2022Updated 4 years ago
- scDIOR: Single cell data IO softwaRe☆156Feb 15, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Whole mouse brain snATAC seq analysis☆29Apr 18, 2025Updated last year
- Landscape Single Cell Entropy☆23Aug 24, 2020Updated 5 years ago
- ☆90Apr 5, 2021Updated 5 years ago
- This contains the dataset for comparing scRNA-seq analysis methods☆94Aug 26, 2020Updated 5 years ago
- A collection of 50+ trajectory inference methods within a common interface 📥📤☆132Dec 21, 2023Updated 2 years ago
- UMCU Genetics Nextflow modules☆30Oct 25, 2024Updated last year
- Multi-sample multi-group scRNA-seq analysis tools☆235Jun 4, 2026Updated 3 weeks ago