an easy deindex tool for illumina multiple barcodes sequencing
☆12Jul 30, 2015Updated 10 years ago
Alternatives and similar repositories for deindexer
Users that are interested in deindexer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A pipeline to assess the quantification of transcripts.☆19Jun 6, 2022Updated 3 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Apr 25, 2023Updated 2 years ago
- ☆28Jan 28, 2020Updated 6 years ago
- ☆21Jul 3, 2019Updated 6 years ago
- Random utility scripts for genomics data☆12Feb 22, 2021Updated 5 years ago
- DEPRECATED Tools for manipulating cell expression format (CEF) files☆12Oct 10, 2017Updated 8 years ago
- Workflows and analysis of scRNA-seq of Olfactory Projection Neurons for Li, Horns et al. (2017)☆21Aug 17, 2017Updated 8 years ago
- A command-line finder with fzf☆15Nov 7, 2015Updated 10 years ago
- S3proxy provides a simple REST-interface to files and keys stored on the AWS S3 service.☆13Apr 2, 2014Updated 11 years ago
- SCOUP is a probabilistic model to analyze single-cell expression data during differentiation☆10Apr 20, 2017Updated 8 years ago
- This project has an interactive tutorial for plan9☆17Dec 14, 2016Updated 9 years ago
- ☆11Jan 5, 2021Updated 5 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Jan 21, 2018Updated 8 years ago
- Analysis notebooks for "SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes".☆14Nov 20, 2020Updated 5 years ago
- A template for a Markdown/Pandoc template for a UC Davis PhD dissertation or Masters' thesis☆23Feb 20, 2016Updated 10 years ago
- Molecular analysis of pre-invasive lung cancer samples☆14Jan 18, 2019Updated 7 years ago
- Coupled clustering of single cell genomic data☆13Sep 21, 2021Updated 4 years ago
- CRUK Bioinformatics Workshop September 2017☆18Sep 21, 2017Updated 8 years ago
- sbt plugin for scalaprops. provides tab completion, scala-native support☆12Mar 16, 2026Updated last week
- Human Postmortem ASD RNA-seq Analysis Parikshak et al 2016☆15Sep 28, 2021Updated 4 years ago
- A software package for analyzing snapshots of developmental processes☆158Sep 15, 2022Updated 3 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Mar 17, 2022Updated 4 years ago
- ☆17Jun 5, 2019Updated 6 years ago
- Analysing Capture Seq Count Data☆13Jun 11, 2018Updated 7 years ago
- Analaysis for the batch correction paper☆12Apr 26, 2025Updated 10 months ago
- S3-compatible storage resource plugin for iRODS☆12Mar 3, 2026Updated 2 weeks ago
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Aug 29, 2024Updated last year
- This is Kanban Board connected to Backlog☆18Nov 30, 2018Updated 7 years ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Dec 29, 2025Updated 2 months ago
- SVG based genome viewer written in javascript using D3☆33Jul 12, 2015Updated 10 years ago
- Utilities and tools for machine learning on BOLD-fMRI data☆14Feb 8, 2021Updated 5 years ago
- ☆14Nov 21, 2025Updated 4 months ago
- Code for Shipman et al. 2017☆13Jul 12, 2017Updated 8 years ago
- Must-read papers on deep learning based methodology paper for single cell data analysis☆19Apr 18, 2021Updated 4 years ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Dec 8, 2019Updated 6 years ago
- DEPRECATED: Store and query public TCGA data☆11Sep 15, 2016Updated 9 years ago
- Rapid discovery of reciprocal best blast pairs.☆10Nov 9, 2024Updated last year
- A fancy book template full of ink perfume.☆16Jul 2, 2019Updated 6 years ago
- simpler single cell RNAseq data clustering☆43Feb 28, 2025Updated last year