shibiaowan / SHARPLinks
SHARP: Single-cell RNA-seq Hyper-fast and Accurate processing via ensemble Random Projection
☆17Updated 4 years ago
Alternatives and similar repositories for SHARP
Users that are interested in SHARP are comparing it to the libraries listed below
Sorting:
- A study to compare methods for clustering of scRNA-seq data☆44Updated last year
- Marker gene selection from scRNA-seq data☆16Updated 5 years ago
- Version 2.1.0 released☆23Updated 6 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated last year
- ☆11Updated 6 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆23Updated last year
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆16Updated 6 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Updated 4 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆53Updated 5 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆32Updated 3 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆46Updated 9 years ago
- Single-cell Case Control Analysis☆52Updated this week
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆12Updated last year
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and S…☆44Updated last year
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated last month
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆27Updated 6 years ago
- Scripts for data and figure generation in SAVER paper☆17Updated 5 years ago
- Clone identification from single-cell data☆61Updated 3 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆18Updated 4 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- Single cell RNA-seq and ATAC seq analysis of cardiac progenitor cell transition states and lineage settlement☆10Updated 5 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated 2 years ago