shibiaowan / SHARPLinks
SHARP: Single-cell RNA-seq Hyper-fast and Accurate processing via ensemble Random Projection
☆17Updated 4 years ago
Alternatives and similar repositories for SHARP
Users that are interested in SHARP are comparing it to the libraries listed below
Sorting:
- A study to compare methods for clustering of scRNA-seq data☆45Updated last year
- Marker Selection by matching manifolds and elastic net☆23Updated last year
- Marker gene selection from scRNA-seq data☆16Updated 5 years ago
- Version 2.1.0 released☆23Updated 6 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- ☆28Updated 7 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆23Updated last year
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆16Updated 6 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Updated last year
- ☆11Updated 6 years ago
- Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018☆22Updated 7 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- <<------ Use SnapATAC!!☆26Updated 6 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 4 years ago
- Single-cell Scalable Visualization and Analytics☆27Updated 6 years ago
- COMET Single-Cell Marker Detection tool☆32Updated 3 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Updated 3 years ago
- ☆15Updated 2 years ago
- ☆37Updated 2 weeks ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- CiteFuse:☆28Updated 3 years ago
- ☆43Updated 5 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated 2 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated 2 months ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Updated 4 years ago
- Single-cell Case Control Analysis☆52Updated last week
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago