☆16Feb 6, 2020Updated 6 years ago
Alternatives and similar repositories for MDeep
Users that are interested in MDeep are comparing it to the libraries listed below
Sorting:
- Code depository for papers☆27Oct 22, 2025Updated 4 months ago
- Bioinformatics for Benched Biologists☆22Apr 30, 2020Updated 5 years ago
- The objective of this work is to develop machine learning (ML) methods that can accurately predict adverse drug reactions (ADRs) using th…☆27Oct 25, 2023Updated 2 years ago
- Linking MAGs with 16S rRNA marker genes☆27Feb 8, 2025Updated last year
- My computational biology course as it evolves in real time☆14Aug 31, 2021Updated 4 years ago
- ☆28Jan 28, 2020Updated 6 years ago
- Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.☆33Jun 18, 2023Updated 2 years ago
- ☆35May 23, 2022Updated 3 years ago
- Clonal reconstruction from HTS data☆10Oct 27, 2021Updated 4 years ago
- This repository contains a QSAR model that predicts the ability of a chemical compound to inhibit the gene associated with Alzheimer's, B…☆11Oct 1, 2021Updated 4 years ago
- An R package to call oomycete effectors☆11Aug 31, 2023Updated 2 years ago
- Predicting Activated Sludge Microbial Communities based on time series of continuous sludge samples by using graph neural networks☆17Feb 23, 2026Updated last week
- Precise phylogenetic analysis of microbial isolates and genomes from metagenomes☆161Feb 13, 2026Updated 2 weeks ago
- Statistical Mechanics for Chemistry and Biology☆13Feb 25, 2026Updated last week
- detectRuns: a R Package for Runs of Homozygosity and Runs of Heterozygosity☆12May 25, 2023Updated 2 years ago
- Educational Notes on Molecular Modeling☆13Nov 19, 2020Updated 5 years ago
- Harnessing FABRIC for Scalable Human Genome Sequence Analysis☆12Feb 7, 2026Updated 3 weeks ago
- Python package providing functionality and plotting for chemistry method comparison☆16Feb 28, 2024Updated 2 years ago
- This is the repo for CROssBARv2 Knowledge Graph data. CROssBARv2 is a heterogeneous general-purpose biomedical KG-based system.☆11Feb 4, 2026Updated last month
- This is a read-only mirror of the CRAN R package repository. glinternet — Learning Interactions via Hierarchical Group-Lasso Regulariza…☆13Sep 3, 2021Updated 4 years ago
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated last year
- An R interface to the omixer-rpm for turning metagenomic functional profiles into pathway/module profiles☆12Dec 16, 2022Updated 3 years ago
- COnstraint-based Reconstruction and Analysis (COBRA) of metabolic networks in R☆15Updated this week
- Higher-Order Co-occurrence☆12Nov 9, 2021Updated 4 years ago
- ☆16Jul 5, 2019Updated 6 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 6 years ago
- RaMWAS: Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms☆10Sep 22, 2021Updated 4 years ago
- misFinder: Identify mis-assemblies in an unbiased manner using reference and paired-end reads☆10Oct 17, 2015Updated 10 years ago
- ☆12Jan 27, 2023Updated 3 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Oct 30, 2025Updated 4 months ago
- RStudio Cloud ☁️ resources to accompany tidymodels.org☆12Oct 28, 2021Updated 4 years ago
- The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer☆11Oct 30, 2025Updated 4 months ago
- Streamlit web application to deploy a machine learning binary classifier to predict the activity of antimicrobial peptides☆10Dec 13, 2022Updated 3 years ago
- Causal Variant Evidence Mapping with Non-parametric resampling☆12Dec 16, 2020Updated 5 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Oct 15, 2025Updated 4 months ago
- Embroid: Unsupervised Prediction Smoothing Can Improve Few-Shot Classification☆11Aug 12, 2023Updated 2 years ago
- ☆11May 27, 2024Updated last year
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 7 years ago
- ☆11Jun 18, 2024Updated last year