steuernb / NLR-AnnotatorLinks
NLR-Annotator upload
☆76Updated 2 years ago
Alternatives and similar repositories for NLR-Annotator
Users that are interested in NLR-Annotator are comparing it to the libraries listed below
Sorting:
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆85Updated 4 years ago
- ☆84Updated last year
- Neural network classification of TE☆97Updated 3 months ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆108Updated last month
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆86Updated 2 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago
- Detailed bioinformatics scripts and methods used in the NAM genome paper.☆87Updated 11 months ago
- A pipeline used to identify different modes of duplicated gene pairs☆116Updated 5 months ago
- A parallel wrapper for LTR_FINDER☆55Updated 9 months ago
- DNA序列比对结果 可视化展示工具☆57Updated 3 years ago
- Code to compute the XP-CLR statistic to infer natural selection☆101Updated 3 years ago
- TransposonUltimate - a holistic set of tools for transposon identification☆85Updated 3 years ago
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆101Updated last month
- Analysis of convergence between organismal traits and DNA/protein sequences☆60Updated this week
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- Genome annotation pipeline☆65Updated last year
- Application of pan-genome for population☆116Updated 2 months ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆102Updated 4 months ago
- A program to call variants from genome alignment☆81Updated 8 months ago
- This is the standalone version of the EviAnn pipeline☆133Updated 3 weeks ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 6 years ago
- tomato graph pangenome☆85Updated 3 years ago
- TEtrimmer: a novel tool to automate manual curation of transposable elements☆110Updated this week
- ☆77Updated 6 years ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆111Updated 4 months ago
- Useful bioinformatic scripts☆58Updated last year
- source code for EVM☆120Updated last year
- Workflow for Building Microsynteny Networks☆58Updated 3 years ago
- Mapping pipeline for data generated using Arima-HiC☆81Updated last year