Gaius-Augustus / TSEBRA
TSEBRA: Transcript Selector for BRAKER
☆47Updated 5 months ago
Related projects ⓘ
Alternatives and complementary repositories for TSEBRA
- ☆69Updated last month
- ☆42Updated 7 years ago
- High-precision TE Annotator☆58Updated this week
- Synteny Imager☆60Updated 2 months ago
- paml documentation and tutorials☆45Updated last year
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆64Updated 3 weeks ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆33Updated 2 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆67Updated 3 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆50Updated last year
- ☆61Updated 6 months ago
- A shiny application to visualize MCscan result☆33Updated 2 years ago
- A organelle de novo genome assembly toolkit☆43Updated last week
- Splitting of sequence reads by internal adapter sequence search☆51Updated last year
- Simple pileup-based variant caller☆81Updated 7 months ago
- Show pangenome graphs in an easy way☆53Updated 2 years ago
- A tool for evaluate long-read de novo assembly results☆41Updated 2 months ago
- TGS scaffolding☆45Updated 2 years ago
- Pipeline to convert a haploid assembly into diploid☆90Updated 5 months ago
- A program to call variants from genome alignment☆76Updated 7 months ago
- Neural network classification of TE☆83Updated 2 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆49Updated last month
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆41Updated 8 months ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆55Updated last month
- Predict 5mC in PacBio HiFi reads☆32Updated last week
- ☆57Updated 3 weeks ago
- Genome Annotation Pipeline☆32Updated 2 months ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆34Updated this week
- A list of software for pangenomics☆85Updated 2 weeks ago
- Reference-free profiling of polyploid genomes☆103Updated 3 months ago