Gaius-Augustus / TSEBRALinks
TSEBRA: Transcript Selector for BRAKER
☆47Updated 8 months ago
Alternatives and similar repositories for TSEBRA
Users that are interested in TSEBRA are comparing it to the libraries listed below
Sorting:
- A organelle de novo genome assembly toolkit☆60Updated 4 months ago
- ☆74Updated this week
- ☆44Updated 8 years ago
- A tool for evaluate long-read de novo assembly results☆48Updated 10 months ago
- A program for assessing the T2T genome continuity☆81Updated 2 weeks ago
- ☆63Updated last week
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆57Updated 2 years ago
- Call select base modifications in PacBio HiFi reads☆8Updated 5 months ago
- MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆71Updated 3 months ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- ☆32Updated 4 years ago
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆43Updated this week
- Synteny Imager☆63Updated 10 months ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆49Updated last year
- Pipeline to convert a haploid assembly into diploid☆100Updated 5 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 5 months ago
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- Show pangenome graphs in an easy way☆56Updated 2 years ago
- This is the standalone version of the EviAnn pipeline☆100Updated this week
- Neural network classification of TE☆90Updated last month
- ☆76Updated 5 years ago
- A Nextflow pipeline for evaluating assembly quality☆34Updated 2 weeks ago
- meta-pipeline for repetitive element de-fragmentation and annotation☆25Updated 4 years ago
- SRF: Satellite Repeat Finder☆96Updated last year
- ☆28Updated last year
- A program to call variants from genome alignment☆81Updated 2 months ago