Gaius-Augustus / TSEBRALinks
TSEBRA: Transcript Selector for BRAKER
☆48Updated 10 months ago
Alternatives and similar repositories for TSEBRA
Users that are interested in TSEBRA are comparing it to the libraries listed below
Sorting:
- A organelle de novo genome assembly toolkit☆69Updated 6 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- A program for assessing the T2T genome continuity☆84Updated this week
- ☆79Updated 2 months ago
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆44Updated 2 months ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆69Updated last week
- Call select base modifications in PacBio HiFi reads☆14Updated 7 months ago
- ☆44Updated 8 years ago
- A tool for evaluate long-read de novo assembly results☆48Updated last year
- A tool for evaluating long-read de novo assembly results☆43Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆73Updated 4 years ago
- MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆72Updated 2 weeks ago
- Synteny Imager☆64Updated last month
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- PacBio BAM toolkit☆46Updated 6 months ago
- ☆66Updated 2 weeks ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆57Updated last week
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆68Updated 4 years ago
- Show pangenome graphs in an easy way☆56Updated last month
- SRF: Satellite Repeat Finder☆97Updated last year
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆50Updated 2 months ago
- ☆32Updated 4 years ago
- RepeatIdentifier☆69Updated 6 months ago
- Python wrappers for programs that search for transposable elements☆19Updated 9 years ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- TEtrimmer: a novel tool to automate manual curation of transposable elements☆76Updated 2 weeks ago
- ☆44Updated 2 years ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 7 months ago