Gaius-Augustus / TSEBRALinks
TSEBRA: Transcript Selector for BRAKER
☆48Updated last week
Alternatives and similar repositories for TSEBRA
Users that are interested in TSEBRA are comparing it to the libraries listed below
Sorting:
- A organelle de novo genome assembly toolkit☆70Updated 8 months ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- A tool for evaluating long-read de novo assembly results☆48Updated last year
- ☆45Updated 8 years ago
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- A program for assessing the T2T genome continuity☆89Updated last month
- ☆81Updated last month
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆46Updated 4 months ago
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆72Updated 2 months ago
- A tool for evaluate long-read de novo assembly results☆48Updated last year
- Call select base modifications in PacBio HiFi reads☆15Updated last week
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆75Updated 4 years ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆54Updated 4 months ago
- ☆29Updated last year
- TGS scaffolding☆47Updated 4 years ago
- Neural network classification of TE☆96Updated last month
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 9 months ago
- PacBio BAM toolkit☆46Updated 8 months ago
- Show pangenome graphs in an easy way☆56Updated 3 months ago
- Pipeline to convert a haploid assembly into diploid☆107Updated 9 months ago
- ☆67Updated 2 weeks ago
- MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆75Updated 2 months ago
- Multi-genome synteny block visualization tool☆47Updated last month
- A program to call variants from genome alignment☆81Updated 6 months ago
- Synteny Imager☆65Updated 3 weeks ago
- Identification of transposable element families from pangenome polymorphisms☆53Updated 5 months ago
- RepeatIdentifier☆70Updated 8 months ago