Gaius-Augustus / TSEBRA
TSEBRA: Transcript Selector for BRAKER
☆47Updated last week
Related projects ⓘ
Alternatives and complementary repositories for TSEBRA
- ☆72Updated last month
- ☆43Updated 7 years ago
- A shiny application to visualize MCscan result☆33Updated 2 years ago
- Synteny Imager☆60Updated 2 months ago
- High-precision TE Annotator☆65Updated last week
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆33Updated 2 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆51Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆68Updated 3 years ago
- A organelle de novo genome assembly toolkit☆44Updated 3 weeks ago
- A tool for evaluate long-read de novo assembly results☆42Updated 2 months ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆64Updated last month
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆37Updated 4 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆78Updated 3 years ago
- ☆61Updated 7 months ago
- TGS scaffolding☆45Updated 3 years ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆38Updated 2 weeks ago
- paml documentation and tutorials☆47Updated last year
- Analysis of convergence between organismal traits and DNA/protein sequences☆46Updated 4 months ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆43Updated 9 months ago
- ☆60Updated last month
- Splitting of sequence reads by internal adapter sequence search☆52Updated last year
- A program to call variants from genome alignment☆76Updated 8 months ago
- Show pangenome graphs in an easy way☆53Updated 2 years ago
- Neural network classification of TE☆86Updated 2 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆52Updated last month
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆56Updated last month
- meta-pipeline for repetitive element de-fragmentation and annotation☆24Updated 4 years ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆63Updated 3 years ago
- ☆39Updated 2 years ago