Identification of conserved non-coding sequences in plants
☆35Feb 4, 2026Updated last month
Alternatives and similar repositories for Conservatory
Users that are interested in Conservatory are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated last year
- Strand and WGD aware syntenic gene identification☆16Oct 16, 2025Updated 5 months ago
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆25Feb 9, 2026Updated last month
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆20Feb 13, 2026Updated last month
- Neural network classification of TE☆97Oct 9, 2025Updated 5 months ago
- conserved non-coding sequence☆16Feb 21, 2022Updated 4 years ago
- A repo contains historical and updated MTEC libraries.☆18Feb 6, 2020Updated 6 years ago
- Genome alignment and synteny plots☆34Jun 5, 2023Updated 2 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆42Updated this week
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆54Feb 27, 2020Updated 6 years ago
- Guided synteny alignment between duplicated genomes (within specified quota constraint)☆59Sep 5, 2017Updated 8 years ago
- ☆12Nov 23, 2020Updated 5 years ago
- Constructing a pangenome gene graph☆205Aug 11, 2025Updated 7 months ago
- ☆86Jul 12, 2024Updated last year
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆23Nov 21, 2023Updated 2 years ago
- Yet another Hi-C scaffolding tool☆174Nov 4, 2024Updated last year
- A viewer for multiple alignment format (MAF) files in JBrowse 2☆14Mar 14, 2026Updated last week
- ☆45Oct 29, 2022Updated 3 years ago
- This is a series of scripts on the rapid construction of target interval consensus sequences from bam files and the rapid construction of…☆17Jan 12, 2024Updated 2 years ago
- This is the standalone version of the EviAnn pipeline☆142Mar 13, 2026Updated last week
- Segmental duplication detection tool☆16Feb 7, 2023Updated 3 years ago
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆26Oct 24, 2025Updated 5 months ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated last year
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Dec 5, 2024Updated last year
- ☆12Jun 12, 2023Updated 2 years ago
- ☆21Jan 29, 2024Updated 2 years ago
- RepeatIdentifier☆72Mar 19, 2025Updated last year
- Toolkit for evolutionary analyses of linkage groups☆34Jul 17, 2024Updated last year
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Mar 3, 2025Updated last year
- SNP genotyping in polyploids☆16Aug 12, 2020Updated 5 years ago
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Nov 1, 2024Updated last year
- parallelLastz: Running Lastz in parallel☆18Sep 13, 2024Updated last year
- NLR-Annotator upload☆76Jul 19, 2023Updated 2 years ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆35Jan 15, 2025Updated last year
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆25Jul 21, 2021Updated 4 years ago
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 4 years ago
- This is used to call Codeml to calculate the positive selection of gene in Branch-Sites Model.(Require codon sequence)☆18Nov 18, 2021Updated 4 years ago