YaoZhou89 / WGScLinks
☆15Updated 3 years ago
Alternatives and similar repositories for WGSc
Users that are interested in WGSc are comparing it to the libraries listed below
Sorting:
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated last month
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆14Updated last week
- SINE annotation tool for plant genomes☆18Updated last year
- Some components that speed up and reduce resource cost for original ALLHiC☆14Updated 2 months ago
- B73Ab10 genome assembly methods☆16Updated 3 years ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- Simple tools for working with Hi-C data☆18Updated 6 years ago
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆14Updated last year
- ☆27Updated 5 months ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- ☆28Updated 3 years ago
- Construct and Analyze the North American Vitis pangenome☆24Updated last month
- Yet another Hi-C scaffolding tool☆22Updated 10 months ago
- Identification of conserved non-coding sequences in plants☆22Updated last week
- Add multiple thread function for genome comparison☆16Updated 3 years ago
- ☆16Updated 4 years ago
- ☆15Updated last year
- parallelLastz: Running Lastz in parallel☆16Updated last year
- A pipeline for genomic variant detection with genome assemblies at population scale☆27Updated 3 months ago
- ☆24Updated last year
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆14Updated last year
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Updated 2 months ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆28Updated 8 months ago
- plot genome alignment synteny☆21Updated 5 years ago
- Inferring natural selection by comparative population genomic analysis across species☆25Updated last year
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆29Updated 3 years ago
- ☆16Updated 2 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Updated 3 months ago
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆17Updated 7 months ago