panlab-bioinfo / Gap-AidLinks
☆14Updated 3 weeks ago
Alternatives and similar repositories for Gap-Aid
Users that are interested in Gap-Aid are comparing it to the libraries listed below
Sorting:
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 7 years ago
- ☆16Updated 2 years ago
- ☆12Updated 2 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆34Updated 3 weeks ago
- ☆29Updated 7 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Updated 11 months ago
- A gap-closing software tool that uses long reads to enhance genome assembly.☆19Updated last year
- Telomere compliment tools☆20Updated 2 weeks ago
- A genome assembly assessment pipeline.☆37Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated 3 weeks ago
- An Example of Subgenome Phasing for Complex Allopolyploidy☆13Updated last week
- ☆21Updated last year
- ☆24Updated this week
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Updated 6 months ago
- Genome alignment and synteny plots☆33Updated 2 years ago
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆13Updated last week
- Domain based annotation of transposable elements☆20Updated last month
- Diploid genome assembly analysis tools☆14Updated last year
- ☆32Updated 8 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- ☆28Updated 3 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆30Updated 3 years ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Updated 8 months ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Updated 5 months ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆31Updated 5 months ago
- ☆16Updated last year
- ☆25Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆24Updated 8 months ago