slt666666 / NLRtrackerView external linksLinks
NLR annotation tool
☆35Mar 6, 2024Updated last year
Alternatives and similar repositories for NLRtracker
Users that are interested in NLRtracker are comparing it to the libraries listed below
Sorting:
- Package to Draw NLR Domain Architecture using NLRtracker Output☆15Jul 30, 2021Updated 4 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆41Updated this week
- We report a section-wide NLRome for the tuber-bearing section Petota, including the most important non-cereal food crop potato. Evolution…☆18Oct 31, 2025Updated 3 months ago
- NLR-Annotator upload☆76Jul 19, 2023Updated 2 years ago
- ☆14Nov 4, 2024Updated last year
- Convert GFF file to GenBank file format while extracting the sequences between the annotated regions☆14Sep 6, 2023Updated 2 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- Annotation Pipeline for NLR genes☆16Dec 6, 2018Updated 7 years ago
- ☆18Jan 29, 2025Updated last year
- tutorial on pggb☆36Jan 13, 2025Updated last year
- Programs implementing the trio-binning genome assembly method☆21Nov 22, 2023Updated 2 years ago
- ☆16Jan 14, 2026Updated last month
- ☆13Nov 13, 2023Updated 2 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- ☆28Aug 7, 2025Updated 6 months ago
- Parallel implementation of OrthoMCL☆21Aug 26, 2022Updated 3 years ago
- Scripting analyses of genomes in Ensembl Plants☆42Jan 1, 2026Updated last month
- Efficient indexing and querying of annotations in a pangenome graph☆10Oct 29, 2025Updated 3 months ago
- ☆10May 22, 2025Updated 8 months ago
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆12Sep 26, 2017Updated 8 years ago
- An R package to perform systematic quality checks on comparative genomics analyses☆12Jan 12, 2024Updated 2 years ago
- Genotyping lots of samples with big pangenomes☆11Oct 30, 2025Updated 3 months ago
- The full-length Homology-based R-gene Prediction (HRP) pipeline to comprehensively identify full-length NB-LRR gene models within genome …☆11Jul 27, 2023Updated 2 years ago
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10Jan 27, 2026Updated 2 weeks ago
- Find Unique genomic Regions☆32Jan 26, 2026Updated 2 weeks ago
- SV calling for diploid assemblies☆31Mar 22, 2024Updated last year
- PLLaMA: an Open-source Large Language Model for Plants☆32Jan 29, 2024Updated 2 years ago
- Extracting paths from assembly graphs☆24Apr 26, 2024Updated last year
- De novo genome assembler.☆11Jul 30, 2018Updated 7 years ago
- trackc aims to produce beautiful genome tracks that are highly customizable☆16Jan 21, 2026Updated 3 weeks ago
- Genome haplotype assembly and assessment method☆12Nov 24, 2023Updated 2 years ago
- ☆17Jan 20, 2026Updated 3 weeks ago
- A Shiny App for Interactive RNAseq Analysis and Visualization☆14Aug 6, 2024Updated last year
- Generating UTRs from SHort Reads☆11Sep 28, 2020Updated 5 years ago
- tool for dating gene age by micro- and macro-synteny with high speed and accuracy☆15Jan 3, 2026Updated last month
- DNA序列比对结果 可视化展示工具☆57Dec 18, 2022Updated 3 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆32Jun 10, 2025Updated 8 months ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆15Apr 22, 2024Updated last year
- LAVA (LAMP Assay Versatile Analysis) is an extendable open-source Loop-mediated isothermal AMPlification (LAMP)☆19Aug 24, 2023Updated 2 years ago