Alternatives and similar repositories for calc_switchErr:

Users that are interested in calc_switchErr are comparing it to the libraries listed below

• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆22Updated 2 months ago
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated last year
• cchauve / ANGeS
  Reconstruction of ancestral genome maps
  ☆16Updated 7 years ago
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆29Updated 3 months ago
• amsession / Kmer-based-Subgenome-Mapping
  ☆20Updated 9 months ago
• Kirovez / pyTanFinder
  Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results
  ☆12Updated 6 years ago
• baozg / phased-assembly-check
  ☆29Updated 4 months ago
• ShuaiNIEgithub / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆18Updated last year
• JM-SONG / GenomeSyn
  ☆25Updated 3 years ago
• xjtu-omics / HiCAT
  HiCAT new project
  ☆27Updated last year
• rpianezza / GenomeDelta
  Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…
  ☆17Updated 5 months ago
• lardo / khaper
  ☆27Updated 2 years ago
• JiaoLab2021 / varigraph
  An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes
  ☆28Updated 2 months ago
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year
• yilinZhang-bio / Watermelon-pangenome
  ☆22Updated last year
• Longhui-Ren / Ancestral_Genome_Reconstruction
  Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO
  ☆13Updated 6 years ago
• jkimlab / DESCHRAMBLER
  ☆23Updated last year
• ChenHuaLab / CEGA
  Inferring natural selection by comparative population genomic analysis across species
  ☆23Updated last year
• panlab-bioinfo / Gap-Aid
  ☆12Updated last week
• nbedelman / DiscovarCompGenomics
  ☆12Updated 5 years ago
• c-zhou / polyGembler
  ☆16Updated 2 years ago
• rivasiker / autocoalhmm
  Automated pipeline for running CoalHMM
  ☆13Updated last year
• Adamtaranto / TRF2GFF
  Convert Tandem Repeat Finder dat file output into gff3 format
  ☆27Updated 4 months ago
• Argonum-Clever2 / mike
  ☆29Updated last month
• simon19891216 / CentIER
  ☆29Updated 8 months ago
• xiekunwhy / kmerDedup
  Reduce genome assembly redundancy using shared mapped k-mer method.
  ☆13Updated last week
• LQHHHHH / paml-yn00-run-pipeline
  A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method
  ☆9Updated 2 months ago
• lurebgi / BOPsexChr
  Analyses of sex chromosome evolution in songbirds
  ☆16Updated 5 years ago
• SwallowGenomics / BarnSwallow
  ☆12Updated 2 years ago
• CMB-BNU / PloidyFrost
  reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph
  ☆16Updated last year