weigelworld / pan-nlromeLinks
The GitHub repository for the A. thaliana pan-NLR'ome project.
☆17Updated 6 years ago
Alternatives and similar repositories for pan-nlrome
Users that are interested in pan-nlrome are comparing it to the libraries listed below
Sorting:
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- Study of TE evolution in a population of genomes☆9Updated last year
- ☆15Updated 5 years ago
- ☆14Updated 3 years ago
- B73Ab10 genome assembly methods☆16Updated 3 years ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆17Updated 2 years ago
- ☆25Updated 2 years ago
- Scripts for NGS processing☆17Updated 7 years ago
- scripts for the project of seven thaliana genomes assembly☆39Updated 4 years ago
- repository for code used in analysis of open wild wheat consortium☆16Updated 3 years ago
- ☆9Updated 4 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆26Updated 3 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- ☆22Updated 6 years ago
- R package to draw syntenic plots in 3 different styles☆41Updated last year
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 4 years ago
- ☆15Updated 3 years ago
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate species☆10Updated 4 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated 3 months ago
- ☆15Updated last year
- ☆15Updated last year
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated 3 weeks ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 4 years ago
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- ☆16Updated 8 months ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆20Updated 8 months ago
- Genome alignment and synteny plots☆30Updated 2 years ago
- Whole Genome Annotation Pipeline☆17Updated last week
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- Yet another Hi-C scaffolding tool☆20Updated 8 months ago