hewm2008 / ReseqtoolsLinks
A Toolkit for analyzing next-generation DNA Re-Sequencing data
☆14Updated 3 years ago
Alternatives and similar repositories for Reseqtools
Users that are interested in Reseqtools are comparing it to the libraries listed below
Sorting:
- a Semi-automated pipeline for assembling T2T genome☆25Updated 3 months ago
- ☆44Updated 6 months ago
- HiCAT new project☆31Updated 8 months ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆44Updated 4 months ago
- ☆28Updated 3 years ago
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆43Updated 3 weeks ago
- Centromics: visualing centromeres with multiple omics data☆25Updated 11 months ago
- Centromics: visualing centromeres with multiple omics data☆21Updated 2 years ago
- use long sequenced reads to close gaps in assemblies☆40Updated 7 years ago
- A KMER-based genome-wIde Assocation testing approach on polyploids☆41Updated last week
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- ☆41Updated 2 years ago
- Dynamic Elongation of a Genome Assembly Path☆25Updated last month
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- scripts☆20Updated 7 years ago
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆19Updated 2 years ago
- ☆33Updated 10 months ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆49Updated 4 months ago
- ☆45Updated 3 years ago
- Plant genome assembly and annotation pipeline using snakemake☆52Updated 8 months ago
- ☆31Updated 10 months ago
- An efficient assembly tool for plant mitochondrial genome☆69Updated last year
- HELIANO is a software for detection and classification of Helitron-like elements.☆32Updated 8 months ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on Pore-C, HiFi-C/CiFi or Hi-C.☆87Updated 2 weeks ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆37Updated last year
- a gap-filling tools of genome in complex region.☆24Updated last month
- Draw a dot plot from a paf alignment☆38Updated 4 months ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Updated 11 months ago
- ☆32Updated last year