hewm2008 / Reseqtools
A Toolkit for analyzing next-generation DNA Re-Sequencing data
☆14Updated 3 years ago
Alternatives and similar repositories for Reseqtools
Users that are interested in Reseqtools are comparing it to the libraries listed below
Sorting:
- a Semi-automated pipeline for assembling T2T genome☆17Updated this week
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆30Updated 3 months ago
- Dynamic Elongation of a Genome Assembly Path☆21Updated last year
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆18Updated 2 years ago
- scripts☆16Updated 6 years ago
- ☆12Updated this week
- ☆29Updated 8 months ago
- ☆27Updated last month
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆28Updated 2 months ago
- ☆40Updated last year
- ☆29Updated last month
- Centromics: visualing centromeres with multiple omics data☆18Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆44Updated last year
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 months ago
- This is a method to find telomeres and centromeres in plants.☆40Updated last year
- HiCAT new project☆27Updated last year
- ☆25Updated 3 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆41Updated last month
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆24Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆38Updated 8 months ago
- ☆29Updated 4 months ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆27Updated 9 months ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- A tool for quick and accurate calculation of syntenic diversity.☆39Updated 3 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆33Updated 3 months ago
- Genome Annotation Pipeline☆35Updated 8 months ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- ☆22Updated last year