vgteam / giraffe-sv-paperLinks
☆42Updated last year
Alternatives and similar repositories for giraffe-sv-paper
Users that are interested in giraffe-sv-paper are comparing it to the libraries listed below
Sorting:
- ☆31Updated 5 years ago
- ☆30Updated 7 months ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆29Updated 3 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆41Updated 4 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 5 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- A tool for quick and accurate calculation of syntenic diversity.☆42Updated 7 months ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆46Updated 4 years ago
- Draw a dot plot from a paf alignment☆34Updated this week
- Pan-genome Construction and Population Structure Variation Calling pipeline☆42Updated 11 months ago
- ☆36Updated 3 weeks ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆31Updated 6 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- ☆41Updated 2 years ago
- Fast and frugal disk based k-mer counter☆14Updated 4 years ago
- Likelihood-based Selective Sweep Detection☆40Updated last year
- A genome assembly assessment pipeline.☆37Updated last year
- ☆77Updated 5 years ago
- ☆37Updated last year
- ☆31Updated last year
- ☆16Updated 3 years ago
- Plant genome assembly and annotation pipeline using snakemake☆45Updated 3 months ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- ☆36Updated 3 weeks ago
- ☆36Updated last year
- methods for orphan gene prediction paper optimization☆25Updated 3 years ago
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Updated 2 years ago