Annotation Pipeline for NLR genes
☆16Dec 6, 2018Updated 7 years ago
Alternatives and similar repositories for NLR-Parser
Users that are interested in NLR-Parser are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NLR-Annotator upload☆77Jul 19, 2023Updated 3 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Jun 6, 2019Updated 7 years ago
- Pipelines to run STRUCTURE using multiple front-ends (CLUMPAK+StrAuto, Structure_threader)☆13Oct 5, 2020Updated 5 years ago
- A tool set to assess the quality of the per read phasing and reduce the errors.☆13Jun 25, 2020Updated 6 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆14Sep 26, 2017Updated 8 years ago
- DarkHorse2 source code☆11May 3, 2022Updated 4 years ago
- NLR annotation tool☆39Mar 6, 2024Updated 2 years ago
- ☆10Jun 13, 2020Updated 6 years ago
- Package to Draw NLR Domain Architecture using NLRtracker Output☆16Jul 30, 2021Updated 5 years ago
- Design primers for species-specific qPCR☆10Jun 1, 2017Updated 9 years ago
- Perl scripts for working with the GFF format☆16Aug 24, 2011Updated 15 years ago
- A tool for identification of plant long non-coding RNAs.☆10Aug 8, 2023Updated 3 years ago
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Primer design for standard PCR, bisulphite PCR, QPCR and sequencing☆15Nov 23, 2018Updated 7 years ago
- An efficient assembly tool for plant mitochondrial genome☆71May 31, 2024Updated 2 years ago
- A haplotype analysis toolkit for natural variation study.☆36Oct 3, 2023Updated 2 years ago
- A novel algorithm with high detection power for BSA-Seq data analysis - the significant structural variant method☆36Jul 15, 2026Updated last month
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- Guided synteny alignment between duplicated genomes (within specified quota constraint)☆60Sep 5, 2017Updated 8 years ago
- HiCAT new project☆37May 18, 2025Updated last year
- An R package for performing MultiSTAAR procedure in whole-genome sequencing studies☆12Nov 14, 2024Updated last year
- ☆32Aug 2, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆13Jul 16, 2026Updated last month
- An easy way to run BioNano genomic analysis☆27Apr 9, 2021Updated 5 years ago
- An R package for automatically aggregating and summarizing lncRNA analysis results.☆16Mar 5, 2019Updated 7 years ago
- Synteny matrix representation with maximum likelihood pipeline☆16Jul 7, 2021Updated 5 years ago
- ☆21May 27, 2024Updated 2 years ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated last year
- A clone of the official AMOS git repo on sourceforge: https://sourceforge.net/projects/amos/☆19Nov 15, 2012Updated 13 years ago
- trans-species prediction of TFBS in plants☆14Apr 26, 2021Updated 5 years ago
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆17Jun 2, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆11Mar 14, 2026Updated 5 months ago
- Bring Your Own Bioinformatics☆27Apr 28, 2016Updated 10 years ago
- Draw the Gene structure based on the GFF and gene's ID☆10Jun 13, 2020Updated 6 years ago
- ☆78Dec 4, 2019Updated 6 years ago
- Graphical interactive tool for the visualization of sequence graphs in GFA format.☆76Feb 19, 2019Updated 7 years ago
- ☆30Mar 4, 2022Updated 4 years ago
- Code for paper titled, "Beyond Homology Transfer: Deep Learning for Automated Annotation of Proteins". Preprint available at: http://www.…☆19Jul 26, 2017Updated 9 years ago