Zhenlisme / heliano
HELIANO is a software for detection and classification of Helitron-like elements.
☆26Updated 5 months ago
Alternatives and similar repositories for heliano:
Users that are interested in heliano are comparing it to the libraries listed below
- ☆29Updated 3 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- ☆40Updated last year
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- ☆28Updated last year
- Centromics: visualing centromeres with multiple omics data☆18Updated last year
- ☆35Updated last year
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆29Updated 3 months ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆33Updated 2 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆35Updated 2 years ago
- Dynamic Elongation of a Genome Assembly Path☆21Updated 11 months ago
- ☆20Updated 8 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆33Updated 2 months ago
- Robust identification of orthologous Synteny with the Orthology Index☆17Updated this week
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆27Updated last month
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- ☆19Updated 2 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆26Updated 2 years ago
- ☆27Updated 2 weeks ago
- ☆29Updated 7 months ago
- Centromics: visualing centromeres with multiple omics data☆22Updated last month
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- Toolkit for evolutionary analyses of linkage groups☆31Updated 9 months ago
- Genome Annotation Pipeline☆35Updated 8 months ago
- ☆33Updated 5 months ago
- Plant genome assembly and annotation pipeline using snakemake☆44Updated last year
- This is a method to find telomeres and centromeres in plants.☆40Updated last year
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆16Updated 5 months ago
- HiCAT new project☆27Updated last year
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 6 years ago