Zhenlisme / helianoLinks
HELIANO is a software for detection and classification of Helitron-like elements.
☆29Updated 2 months ago
Alternatives and similar repositories for heliano
Users that are interested in heliano are comparing it to the libraries listed below
Sorting:
- ☆40Updated 2 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- ☆28Updated last year
- ☆31Updated 4 months ago
- Centromics: visualing centromeres with multiple omics data☆19Updated last year
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- ☆21Updated last year
- ☆35Updated 2 weeks ago
- Centromics: visualing centromeres with multiple omics data☆24Updated 5 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 5 months ago
- ☆30Updated 7 months ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- ☆24Updated last year
- Draw a dot plot from a paf alignment☆33Updated 4 months ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆31Updated 6 months ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆34Updated last month
- Multi-genome synteny block visualization tool☆43Updated 6 months ago
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- Automated pipeline for running CoalHMM☆13Updated last year
- Tool for globally phasing diploid assembly graphs with orthogonal data☆40Updated 8 months ago
- Plant genome assembly and annotation pipeline using snakemake☆44Updated 2 months ago
- ☆41Updated 2 years ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆30Updated 6 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆42Updated 6 months ago
- a Semi-automated pipeline for assembling T2T genome☆19Updated 2 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆35Updated 2 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆38Updated last week
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year