simon19891216 / CentIERLinks
☆32Updated 9 months ago
Alternatives and similar repositories for CentIER
Users that are interested in CentIER are comparing it to the libraries listed below
Sorting:
- Dynamic Elongation of a Genome Assembly Path☆21Updated last year
- ☆30Updated 5 months ago
- Plant genome assembly and annotation pipeline using snakemake☆44Updated last month
- ☆40Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆39Updated 4 years ago
- This is a method to find telomeres and centromeres in plants.☆40Updated 2 years ago
- a Semi-automated pipeline for assembling T2T genome☆17Updated last month
- HiCAT new project☆28Updated last month
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆30Updated 5 months ago
- A tool for performing collinearity-incorporating homology inference☆32Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆41Updated 9 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- ☆25Updated 3 years ago
- ☆20Updated 10 months ago
- Genome haplotype assembly and assessment method☆12Updated last year
- A shiny application to visualize MCscan result☆36Updated 2 years ago
- scripts☆16Updated 6 years ago
- Automated pipeline for running CoalHMM☆13Updated last year
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆33Updated 8 months ago
- ☆28Updated last year
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆36Updated last week
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆18Updated 2 years ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆28Updated last week
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆30Updated 5 months ago
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- ☆30Updated 3 months ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆24Updated last year
- ☆27Updated 2 months ago