simon19891216 / CentIER
☆28Updated 6 months ago
Alternatives and similar repositories for CentIER:
Users that are interested in CentIER are comparing it to the libraries listed below
- Dynamic Elongation of a Genome Assembly Path☆21Updated 9 months ago
- HiCAT new project☆27Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆40Updated last year
- ☆39Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆27Updated last month
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- ☆20Updated 6 months ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 3 months ago
- ☆22Updated 2 years ago
- This is a method to find telomeres and centromeres in plants.☆38Updated last year
- A tool for quick and accurate calculation of syntenic diversity.☆34Updated last month
- A tool for performing collinearity-incorporating homology inference☆28Updated last year
- ☆27Updated 2 years ago
- ☆27Updated 3 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- ☆29Updated 2 months ago
- Centromics: visualing centromeres with multiple omics data☆17Updated last year
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆29Updated this week
- Inferring natural selection by comparative population genomic analysis across species☆23Updated last year
- ☆20Updated last year
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆37Updated 8 months ago
- ☆31Updated 3 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆37Updated 5 months ago
- ☆23Updated last year
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 5 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆21Updated this week
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- ☆27Updated last year