simon19891216 / CentIER
☆28Updated 5 months ago
Alternatives and similar repositories for CentIER:
Users that are interested in CentIER are comparing it to the libraries listed below
- Dynamic Elongation of a Genome Assembly Path☆20Updated 8 months ago
- HiCAT new project☆27Updated last year
- A tool for performing collinearity-incorporating homology inference☆28Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆23Updated this week
- ☆22Updated 2 years ago
- This is a method to find telomeres and centromeres in plants.☆37Updated last year
- ☆20Updated 5 months ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- ☆37Updated last year
- Centromics: visualing centromeres with multiple omics data☆17Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆37Updated last year
- ☆29Updated 3 weeks ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆37Updated 7 months ago
- ☆25Updated 3 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆36Updated 4 months ago
- ☆31Updated 2 months ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆17Updated 7 months ago
- ☆27Updated 2 years ago
- A tool for quick and accurate calculation of syntenic diversity.☆33Updated last week
- ☆27Updated last year
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆24Updated last month
- A shiny application to visualize MCscan result☆34Updated 2 years ago
- use long sequenced reads to close gaps in assemblies☆36Updated 6 years ago
- Inferring natural selection by comparative population genomic analysis across species☆23Updated last year
- ☆28Updated 8 months ago
- ☆21Updated 11 months ago
- MITE Tracker: An accurate approach to identify miniature inverted-repeat transposable elements in large genomes☆18Updated 10 months ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago