☆33Sep 29, 2026Updated last week
Alternatives and similar repositories for GINGER
Users that are interested in GINGER are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A program for assessing the T2T genome continuity and completeness☆98Sep 8, 2026Updated last month
- Repeat-aware polishing genomes assembled using HiFi long reads☆105Apr 7, 2026Updated 6 months ago
- A telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification☆188Jun 23, 2026Updated 3 months ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆50Jul 23, 2025Updated last year
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Apr 28, 2025Updated last year
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Sep 25, 2026Updated 2 weeks ago
- ☆23Jan 13, 2026Updated 8 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆45Sep 22, 2025Updated last year
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆67May 17, 2026Updated 4 months ago
- Centromics: visualing centromeres with multiple omics data☆28Mar 4, 2025Updated last year
- ☆36Jun 24, 2026Updated 3 months ago
- source code for EVM☆129Sep 22, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆29May 12, 2026Updated 4 months ago
- This is the standalone version of the EviAnn pipeline☆187Updated this week
- ☆16Apr 3, 2023Updated 3 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆28Dec 7, 2022Updated 3 years ago
- Telomere compliment tools☆27Nov 17, 2025Updated 10 months ago
- FastOMA is a scalable software package to infer orthology relationship.☆102Sep 24, 2026Updated 2 weeks ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 3 years ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated 2 years ago
- Using Deep Learning to predict gene annotations☆308Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Portable solution to generate genome alignment chains using lastz☆73Sep 4, 2026Updated last month
- High throughput python tool for mining and analysis of gene duplications.☆17Jul 30, 2026Updated 2 months ago
- The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding☆14Feb 11, 2025Updated last year
- A novel genome assembly pipeline based on deep learning☆71Dec 2, 2024Updated last year
- HiCAT new project☆39May 18, 2025Updated last year
- HapHiC: a fast, reference-independent, allele-aware scaffolding tool based on Hi-C data☆287Aug 10, 2026Updated 2 months ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆34Jul 13, 2026Updated 2 months ago
- Long-reads Gap-free Chromosome-scale Assembler☆79Mar 21, 2023Updated 3 years ago
- ☆45Dec 11, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆42May 19, 2025Updated last year
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.☆24May 15, 2026Updated 4 months ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆63Jul 5, 2026Updated 3 months ago
- A pipeline for genomic variant detection with genome assemblies at population scale☆43Jun 3, 2025Updated last year
- ☆16Jul 25, 2021Updated 5 years ago