An R package to visualize chromosome scale repeat patterns and predict centromere locations.
☆50May 8, 2026Updated 3 months ago
Alternatives and similar repositories for RepeatOBserverV1
Users that are interested in RepeatOBserverV1 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Centromics: visualing centromeres with multiple omics data☆27Mar 4, 2025Updated last year
- Identify and find telomeres, or telomeric repeats in a genome.☆174Nov 24, 2025Updated 9 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Jul 1, 2026Updated last month
- ☆24Nov 19, 2025Updated 9 months ago
- ☆48Jul 23, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆37Sep 11, 2025Updated 11 months ago
- Telomere compliment tools☆26Nov 17, 2025Updated 9 months ago
- ☆198Feb 10, 2026Updated 6 months ago
- Centromics: visualing centromeres with multiple omics data☆21Jan 18, 2024Updated 2 years ago
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated 2 years ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆39Sep 17, 2022Updated 3 years ago
- satMiner: A Toolkit to NGS satellite DNA mining and analysis☆12Mar 10, 2022Updated 4 years ago
- RepeatIdentifier☆75Mar 19, 2025Updated last year
- ☆19Jul 12, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Tool for globally phasing diploid assembly graphs with orthogonal data☆43Nov 25, 2024Updated last year
- WinPCA. A package for windowed principal component analysis.☆54Jun 9, 2026Updated 2 months ago
- Visualing species tree from ASTRAL with gene tree discordance☆34Aug 21, 2026Updated last week
- ☆39Feb 22, 2023Updated 3 years ago
- ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-orth…☆25Jul 20, 2026Updated last month
- Make colorful identity heatmaps of genomic sequence☆139May 24, 2024Updated 2 years ago
- ☆17Mar 2, 2024Updated 2 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆58Jun 17, 2026Updated 2 months ago
- plot Multiple Sequence Alignment(MSA) of Clustal by python package☆15Mar 14, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A tool for performing collinearity-incorporating homology inference☆34Jul 17, 2026Updated last month
- This is the standalone version of the EviAnn pipeline☆183Aug 11, 2026Updated 2 weeks ago
- Whole genome visualization and comparative genomics in R☆25Feb 18, 2025Updated last year
- A tool for quick and accurate calculation of syntenic diversity.☆45Sep 22, 2025Updated 11 months ago
- ☆24Feb 26, 2026Updated 6 months ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on 3C-based data (Pore-C, CiFi, Hi-C, Omni-C).☆109Jul 23, 2026Updated last month
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Detecting multi-genome synteny using minimizer graph mapping☆115Aug 20, 2026Updated last week
- Annotation helper tool for the manual curation of transposable element consensus sequences☆55Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆32Jun 18, 2026Updated 2 months ago
- Workflow to identify the centromere dip regions (CDR) from methyl BAMs☆16Jun 4, 2025Updated last year
- ☆42May 19, 2025Updated last year
- ☆261Jan 24, 2025Updated last year
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆49Feb 23, 2021Updated 5 years ago
- ☆16Apr 3, 2023Updated 3 years ago
- ☆45Dec 29, 2025Updated 8 months ago